Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi755g00009 ATGGGAACCCCAGAAGCAGAGGAAGAGCTTCTCAAGAAGATTGAAAGGCTGGAAGTTGGTCACGCTCACCTCAGGCAAGAAATGTCGAAGCTCAAGCTCTCTCAGCGACGCAGGTCTCACTCTGTGTCACCACAGCGTTCGAGGTTGGGTGCTGCTTCGTGTAACAAAGGCCCTTCTTCTCCTCTGCAGAGAGAGAGTCGCAGCAATCATGAGAATCAAAATGGTGGCAAGTATCTCAATATCTTGCAGTCAATGGGCCACTCTGTTCATATATTGGATCTTCAATGCCGTATCATATACTGGAACCCTAGTGCTGAAAACCTGTATGGTTATAAAGTTGAAGAAGTTCTTGGGCAGAATGGGATTGAGCTGCTTGTGGACCCCAGTGAATTTGCCTTAGCCAATGATATATTCAACAGTGTCAAGATGGGAGAGAGTTGGACTGGCCAGTTCCCTGTCAGGAATAAGATGGGGGAGAGGTTTACAACTGTGTCAACCAACACACCTTTCTATGATGATGATGGAAGCTTGGTTGGGGTTATTTGTGTCTCCAGTGATTCAAAACCCTTTCTTGAAACCAGAGTTCCCTTTTCAGGAGGGAGGAATGCAGAATCAGATTCAGGTTCCAACTTTCCTAGAAGTGCCATTACAAATAAACTAGGTCTTGACTCTCAGCAGCCACTTCAAGTTGGTCTAGCATCGAAAATTTCAAATTTGGTTAGTCTTGTACTTTTTCATGTTTCTATATTTGAGTATAGCTTGGCGTGTCTTGATGTTGCAATCATTAAAACAGGCATCAAAGACTGTGTTCTTTCTGATCAAAGAGAAGATGGTAATTCCAGTGGAGCTAGCACACCCCGAGGAGAGGTGCCACCATCTCCTTTTGTTGTATTTTCTCATGTTGAAGAGAAATCTCCAGGACAAACTACGAGGGACTCTGGCGATGAGAGTGAAGGAAAACCTATTCACAAGATCATAACTTCTAGGGCTGAAGCATGGATTCAAAAGAAAACATTATCATGGCCATGGAGAGGAAATGATCGGGAAGGATCCGAGGCAAGGAATGTCCGTGTTGCTTGGCCTTGGTTGCAGGGTGATCAGGAAAAAGAGCCAGTTAATCAGAAGAATCCTTTTTCTGCGTTGAAGCCAGAAAGCCAGGTAGGTGAAAGTAATCGACCTGTTAATAATGAGGCTTCAGGATCCTGGTCCTCCTTCAATGTTAACAGCACAAGTAGTACCAGCAGCTGTGGGAGTGGCAGCAGTTCTACTGCCAATAATAAAATGGATGTTGACACTGATTGCTTGGATTATGAAATTTTGTGGGAGGACTTGACAATTGGAGAACAAATTGGGCAAGGTTCTTGTGGAACTGTATATCATGCTCTGTGGTATGGATCAGATGTCGCTGTCAAGGTTTTCTCAAAGCAAGAATACTCTGATGATGTGATATTATCCTTCAGACAAGAGGTGTCTGTTATGAAAAAACTTCGCCATCCAAATATTCTTCTTTTTATGGGGGCAGTGACTTCACCTCAACGTCTATGCATTGTAACAGAGTTTCTCCCACGCGGAAGCTTGTTTCGTTTGCTCCAAAAGCACATATTCAAATTTGACTGGAGACGGCGAGTTCATATGGCCGTAGATATTGCTCGAGGTGTGAATTATCTTCATCATTGCAACCCCCCTATCATCCATCGAGATTTAAAGTCATCCAATCTTCTAGTTGATAAAAATTGGACTGTGAAGGTTGGTGATTTTGGTCTTTCACGTATTAAGCACGAAACATATCTCACAACTAAGACAGGAAAGGGCACGCCTCAATGGATGGCACCAGAAGTTCTTCGTAATGAACCCTCGGATGAGAAATCGGACGTTTACAGCTTTGGGGTGATAATGTGGGAAATTGCAACTGAAAAGATCCCTTGGGATACTCTCAATGCAATGCAGGTTATTGGAGCTGTAGGGTTTATGAACCATCGGCTAGAAATTCCAGAAGATGTTGATCCGCAATGGGCTTCTATAATCGAGAGCTGCTGGCACAGTGATCCAGCTTGCAGACCAACATTCCAGGAACTGCTAGAAAGGCTTAAAGAACTGCAGAGACGGTATGCCATTCAGTTCCAAACAGCCAGATCTGCTGGTGGAGAAGGCACTCAAAAGGAGTCCTAG 2169 0.4412 MGTPEAEEELLKKIERLEVGHAHLRQEMSKLKLSQRRRSHSVSPQRSRLGAASCNKGPSSPLQRESRSNHENQNGGKYLNILQSMGHSVHILDLQCRIIYWNPSAENLYGYKVEEVLGQNGIELLVDPSEFALANDIFNSVKMGESWTGQFPVRNKMGERFTTVSTNTPFYDDDGSLVGVICVSSDSKPFLETRVPFSGGRNAESDSGSNFPRSAITNKLGLDSQQPLQVGLASKISNLVSLVLFHVSIFEYSLACLDVAIIKTGIKDCVLSDQREDGNSSGASTPRGEVPPSPFVVFSHVEEKSPGQTTRDSGDESEGKPIHKIITSRAEAWIQKKTLSWPWRGNDREGSEARNVRVAWPWLQGDQEKEPVNQKNPFSALKPESQVGESNRPVNNEASGSWSSFNVNSTSSTSSCGSGSSSTANNKMDVDTDCLDYEILWEDLTIGEQIGQGSCGTVYHALWYGSDVAVKVFSKQEYSDDVILSFRQEVSVMKKLRHPNILLFMGAVTSPQRLCIVTEFLPRGSLFRLLQKHIFKFDWRRRVHMAVDIARGVNYLHHCNPPIIHRDLKSSNLLVDKNWTVKVGDFGLSRIKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVIMWEIATEKIPWDTLNAMQVIGAVGFMNHRLEIPEDVDPQWASIIESCWHSDPACRPTFQELLERLKELQRRYAIQFQTARSAGGEGTQKES 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi755g00009 722 PRINTS Tyrosine kinase catalytic domain signature 557 575 IPR001245 GO:0004672|GO:0006468
Sebi755g00009 722 PRINTS Tyrosine kinase catalytic domain signature 518 531 IPR001245 GO:0004672|GO:0006468
Sebi755g00009 722 PRINTS Tyrosine kinase catalytic domain signature 667 689 IPR001245 GO:0004672|GO:0006468
Sebi755g00009 722 PRINTS Tyrosine kinase catalytic domain signature 623 645 IPR001245 GO:0004672|GO:0006468
Sebi755g00009 722 PRINTS Tyrosine kinase catalytic domain signature 604 614 IPR001245 GO:0004672|GO:0006468
Sebi755g00009 722 MobiDBLite consensus disorder prediction 301 321 - -
Sebi755g00009 722 CDD PAS 89 186 IPR000014 -
Sebi755g00009 722 Gene3D Transferase(Phosphotransferase) domain 1 522 721 - -
Sebi755g00009 722 Coils Coil 7 27 - -
Sebi755g00009 722 MobiDBLite consensus disorder prediction 44 75 - -
Sebi755g00009 722 FunFam PAS domain-containing protein tyrosine kinase family protein 522 713 - -
Sebi755g00009 722 SUPERFAMILY Protein kinase-like (PK-like) 430 696 IPR011009 -
Sebi755g00009 722 ProSiteProfiles Protein kinase domain profile. 444 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi755g00009 722 NCBIfam PAS domain S-box protein 78 186 IPR000014 -
Sebi755g00009 722 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 202 702 - -
Sebi755g00009 722 FunFam PAS domain-containing protein tyrosine kinase 437 521 - -
Sebi755g00009 722 MobiDBLite consensus disorder prediction 365 403 - -
Sebi755g00009 722 Pfam PAS domain 90 186 IPR000014 -
Sebi755g00009 722 SMART serkin_6 444 704 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi755g00009 722 SMART pas_2 76 142 IPR000014 -
Sebi755g00009 722 CDD STKc_MAP3K-like 450 696 - -
Sebi755g00009 722 MobiDBLite consensus disorder prediction 27 75 - -
Sebi755g00009 722 Gene3D PAS domain 87 189 - -
Sebi755g00009 722 MobiDBLite consensus disorder prediction 275 294 - -
Sebi755g00009 722 SUPERFAMILY PYP-like sensor domain (PAS domain) 80 183 IPR035965 -
Sebi755g00009 722 Pfam Protein tyrosine and serine/threonine kinase 444 696 IPR001245 GO:0004672|GO:0006468
Sebi755g00009 722 Gene3D Phosphorylase Kinase; domain 1 437 521 - -
Sebi755g00009 722 MobiDBLite consensus disorder prediction 369 403 - -
Sebi755g00009 722 MobiDBLite consensus disorder prediction 305 321 - -
Sebi755g00009 722 ProSiteProfiles PAS repeat profile. 74 145 IPR000014 -
Sebi755g00009 722 ProSitePatterns Serine/Threonine protein kinases active-site signature. 563 575 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi755g00009 Sebi-Chr755 66035 71605 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi755g00009 1 713 MAP Kinase Kinase Kinase AT3G06620 56.901 0.0 857
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Sebi755g00009 PK_Tyr_Ser-Thr 6.6e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi755g00009 - - gmx:100815858 1055.05