Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi755g00001 ATGCTTCATGCATTGATGAATCTTCTCTCTCCCTGTTGGAAGCCTTTCGGGCACGGTGATGAGTCTTCAGCTGGCATTGTCGGAAGAGAAGGCAAAGACGGCTTGCTCTGGTTCAGAGATATCGGAAAGTATGGCTCCGGCGAGTTCTCGATGGCGGTGGTTCAGGCCAATCAGGTCCTCGAAGACCAGAGCCAGATCGAGTCCGGTCCTCTCGGCACCTTCGTCGGCGTTTACGATGGCCACGGTGGACCCGACGCGTCGCGATACGTGTGCGATCACTTGTTCCGCAATTTCCAAGGTGCAGCAGTATCGGGTGAGTCACGGGGTGTTGTGACAGCTGAGACCATTCAAACAGCTTTCCGCAGAACAGAAGAGGGTTTCACTGCTCTTGTTTCAGAATTATGGAATACGCGGCCTCAAGTTGCAACTACTGGAACGTGTTGTCTAGTTGGTGTGATTTTTCAACAGACTCTCTTTGTGGCAAATGTTGGAGATTCCCGTGTTGTGTTGGGCAAGAAAGTTGGCAACACTGGTGGGATTGCTGCAATTCAGCTGTCTACGGAACACAATGCAAATCTTGAGGCTGTTAGACAGGAACTCAAAGAATTACACCCTAATGATCCTCAAATTGTCGTCCTCAAACATGGTGTGTGGAGAGTAAAAGGCATTATTCAG 675 0.5007 MLHALMNLLSPCWKPFGHGDESSAGIVGREGKDGLLWFRDIGKYGSGEFSMAVVQANQVLEDQSQIESGPLGTFVGVYDGHGGPDASRYVCDHLFRNFQGAAVSGESRGVVTAETIQTAFRRTEEGFTALVSELWNTRPQVATTGTCCLVGVIFQQTLFVANVGDSRVVLGKKVGNTGGIAAIQLSTEHNANLEAVRQELKELHPNDPQIVVLKHGVWRVKGIIQ 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi755g00001 225 PANTHER PROTEIN PHOSPHATASE 46 225 IPR015655 GO:0004722|GO:0006470
Sebi755g00001 225 CDD PP2Cc 49 225 IPR001932 -
Sebi755g00001 225 Pfam Protein phosphatase 2C 71 195 IPR001932 -
Sebi755g00001 225 SMART PP2C_4 35 224 IPR001932 -
Sebi755g00001 225 ProSitePatterns PPM-type phosphatase domain signature. 74 82 IPR000222 GO:0043169
Sebi755g00001 225 ProSiteProfiles PPM-type phosphatase domain profile. 45 225 IPR001932 -
Sebi755g00001 225 SUPERFAMILY PP2C-like 57 206 IPR036457 -
Sebi755g00001 225 Gene3D - 39 225 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi755g00001 Sebi-Chr755 5139 6245 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi755g00001 4 225 PP2C-type Phosphatase Gene Family AT3G17090 68.534 1.32e-106 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi755g00001 K01102 - gmx:100790813 387.497