Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi753g00006 ATGTCTAACCAATCAGGAAATGAACAAGGGTCTTCTTCATCAGAGGGCAACAAGTCCAATCCTGCTTCATCTTCATCTTCTAAGAGGCATTTGCGCTCTAGGCCCCCTCAAAGTTCTGAGCATAAGCCCTTTTCTGGACTCTCCAATTGGTTGCATTCAGTTGCTAATAGGCAGAGTCCTAGTCCTCCTTCTTTGAACCAGGCAAGAGGAGAGAAAATGGAGCCATCTGACGCAGTGAGTAGCAGTGGTGGTTTGGATGTTGTTTCAGATTCAGCTAGGGGTGATTCAGGGTCTAGTGCTTCCAGGGATCCTGAAGTAGAGGAAGAGTATCAGATACAACTGGCTTTAGAGCTGAGTGCAAAGGAGGATCCTGAGGCTGTGCAGATTGAAGCTGTTAAACAGATCAGTTTAGGCTCTTGTGACCCTGATAATACACCAGCTGAAGTTGTGGCCTACCGATACTGGAATTACAATGCTCTTGGTTATGATGACAAAATCTTGGATGGTTTCTATGATCTGTATGGAATCTTAACGGAGTCAACCTTTGCAACAATGCCTTCCCTTTTAGATCTGCAAGGAAGACCAATCTCTGGCAGTGTCACATGGGAAGCTGTCTTGGTCAATAGGGCTGCTGATTCTAATTTGTTGAAACTCGAGCAAAAAGCCCTGGAGTTGACTGTCAAATCAAGACCTGATTCTGCAGTATTTATAGATAGCAATTTGGTGCGCAAGCTTGCCATGTTTGTGGCTGACTATATGGGTGGACCTGTTGGAGATCCTGAAAGCATGACAAGAGCATGGAGGAGTCTTAGTTACAGTCTGAAAGCAACCCTAGGTAGCATGGTTTTGCCACTTGGTTCTCTAACTATTGGATTGGCTCGGCATCGTGCATTGTTATTTAAGGTTCTAGCTGATAGTTTGGGCATCCCATCTCGGTTGGTGAAAGGACTGCCATATACAGATTCTGATGATGTGGCAATAAACTTTGTCAAGATTGATGATGGAAGGGAGTACATTGTTGACCTAATGGCAGACCCTGGAACTCTTATTCCATCCGATGCAACTGGATCACATATTGAGTATGATGAAACATTTTCTGTGGCCAGTCCTTTATCAAGAGACCTTGATTCGTCTCATGTAGCATCATCTAGCAGTGGGGTTGGAAGTTCTTCTGAAGACACTTCAGATTTTGGGATGCTGGACAGAGGAAACAGATCAAAGCATTCTTCCTATGCAAAGAAAGAATCTGACTTAAGCAGACCCACCACAGGAAAAGAAGAACCAATGAGACCCTTAAATGAATTCAAAAGTCCCCACAATGTTGAGAAAATCACGGGGCAGAAAGCTCCTGGCAGACCTAATCATCCATATGTGCATACAAGATCTTCTTCTTGGAGTGAAGGGGTCAGTTCCCCTGCAGTACGCAGAATGAAAGTCAAAGATGTTTCCCAATATATGATTGATACTGCCAAGGAGAACCCTCACTTGGCCCAGAAACTTCATAATGTTTTACTTGAAAGTGGTGTTGTTGCTCCTCCAAATTTATTTTCTGATATTTATCATGAGGAGTTAGGTTCCCTAACTGAGGCCAACTTACCAACTGAAGCAAAAAATGAACATAAACAGGGAAGTGGACAGCAAAACACTGAGGTTGATGATAATCTTGGTCCTGCTCGATTTTTGCCTCCTTTAACTCACTACAGAGTTCACCATGAAGCAAGTTCTAGCAGTCAGCCAGAGCCTTCTAAGCCTGTAGAAGGTTTAGGAATCAACCTTCCTCTTCATACAAGGGAAGCAGCTGGACAGCATATACCACCTCAGTATGAGCAGAGCAGTCGAAGTGATGGAGATACGGACAGTGCTGGTTATGAGCTGAAGGGTAGTGGTGATGGAGAGCATATTGCTTTGGGAGCAAATTTAGAAGGCGAAAGAAAATCTGATAGCTCAGTAGTAAGCAATGATAGCAGAAAATCTGATTCTGCTTTAGATGATGTTGCCGAGTATGACATTCCATGGGAGGAAATCACGCTGGGCGAGCGTATTGGACTTGGATCATATGGGGAGGTGTACCGTGGTGAATGGCGTGGAACTGAGGTTGCTGTAAAGAGGTTTCTAGATCAAGATATATCTGGGGAATCACTTGAAGAATTCAAAACTGAGGTCAAAATAATGAAAAGATTGAGGCATCCAAATGTCGTTCTCTTCATGGGAGCTGTAACTCGACCTCCGAATCTTTCAATTGTTACTGAATTTCTTCCCAGAGGAAGTTTGTATAGATTAATTCACCGGCCAAATAATCAATTAGATGAGCGAAGAGGTTTGAGAATGGCCCTCGATACTGCTCGAGGAATGAACTATTTGCACAACTGTAGTCCAACAATAGTTCATCGTGATTTGAAGTCTCCGAATCTTCTTGTTGATAAAAATTGGGTTGTAAAGGTATGTGATTTTGGCCTGTCGCGTTTGAAGCATAGCACATTCCTTTCTTCCAGATCGACTGCAGGAACAGCTGAGTGGATGGCTCCTGAGGTGTTGAGAAATGAACCGTCAAATGAAAAGTGTGACGTTTATAGCTTCGGGGTCGTATTGTGGGAGCTCTCTACTTTGCAGCAACCATGGGGAGGAATGAATCCAATGCAAGTTGTTGGTGCTGTAGGTTTCCAATACCGCCGTCTTGACATTCCAGATAATATGGACCCTGCTGTTGCAGATATTATTAGGAAATGCTGGCAGACAGATTCAAAGTTGAGACCTACATTTGCTGAAATATTGGCTGCTCTAAAGCCATTACAGAAACCAATTATTGGTTCTCAAGTTCCTCGACCGGTAGCATCAAGTAGGAAAGAGAAGGCTCAGCCATCAGTTGAAGAAGACCAAGAAAGATAG 2886 0.4359 MSNQSGNEQGSSSSEGNKSNPASSSSSKRHLRSRPPQSSEHKPFSGLSNWLHSVANRQSPSPPSLNQARGEKMEPSDAVSSSGGLDVVSDSARGDSGSSASRDPEVEEEYQIQLALELSAKEDPEAVQIEAVKQISLGSCDPDNTPAEVVAYRYWNYNALGYDDKILDGFYDLYGILTESTFATMPSLLDLQGRPISGSVTWEAVLVNRAADSNLLKLEQKALELTVKSRPDSAVFIDSNLVRKLAMFVADYMGGPVGDPESMTRAWRSLSYSLKATLGSMVLPLGSLTIGLARHRALLFKVLADSLGIPSRLVKGLPYTDSDDVAINFVKIDDGREYIVDLMADPGTLIPSDATGSHIEYDETFSVASPLSRDLDSSHVASSSSGVGSSSEDTSDFGMLDRGNRSKHSSYAKKESDLSRPTTGKEEPMRPLNEFKSPHNVEKITGQKAPGRPNHPYVHTRSSSWSEGVSSPAVRRMKVKDVSQYMIDTAKENPHLAQKLHNVLLESGVVAPPNLFSDIYHEELGSLTEANLPTEAKNEHKQGSGQQNTEVDDNLGPARFLPPLTHYRVHHEASSSSQPEPSKPVEGLGINLPLHTREAAGQHIPPQYEQSSRSDGDTDSAGYELKGSGDGEHIALGANLEGERKSDSSVVSNDSRKSDSALDDVAEYDIPWEEITLGERIGLGSYGEVYRGEWRGTEVAVKRFLDQDISGESLEEFKTEVKIMKRLRHPNVVLFMGAVTRPPNLSIVTEFLPRGSLYRLIHRPNNQLDERRGLRMALDTARGMNYLHNCSPTIVHRDLKSPNLLVDKNWVVKVCDFGLSRLKHSTFLSSRSTAGTAEWMAPEVLRNEPSNEKCDVYSFGVVLWELSTLQQPWGGMNPMQVVGAVGFQYRRLDIPDNMDPAVADIIRKCWQTDSKLRPTFAEILAALKPLQKPIIGSQVPRPVASSRKEKAQPSVEEDQER 961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi753g00006 961 Gene3D Transferase(Phosphotransferase) domain 1 754 936 - -
Sebi753g00006 961 MobiDBLite consensus disorder prediction 82 98 - -
Sebi753g00006 961 ProSiteProfiles Protein kinase domain profile. 675 935 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi753g00006 961 MobiDBLite consensus disorder prediction 1 108 - -
Sebi753g00006 961 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 71 936 - -
Sebi753g00006 961 MobiDBLite consensus disorder prediction 398 437 - -
Sebi753g00006 961 SMART serkin_6 675 935 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi753g00006 961 MobiDBLite consensus disorder prediction 376 470 - -
Sebi753g00006 961 MobiDBLite consensus disorder prediction 938 961 - -
Sebi753g00006 961 FunFam Serine/threonine-protein kinase isoform 1 666 753 - -
Sebi753g00006 961 MobiDBLite consensus disorder prediction 535 553 - -
Sebi753g00006 961 MobiDBLite consensus disorder prediction 1 66 - -
Sebi753g00006 961 FunFam PAS domain-containing protein tyrosine kinase family protein 753 940 - -
Sebi753g00006 961 ProSitePatterns Protein kinases ATP-binding region signature. 681 702 IPR017441 GO:0005524
Sebi753g00006 961 MobiDBLite consensus disorder prediction 603 660 - -
Sebi753g00006 961 ProSitePatterns Serine/Threonine protein kinases active-site signature. 794 806 IPR008271 GO:0004672|GO:0006468
Sebi753g00006 961 Pfam Protein tyrosine and serine/threonine kinase 675 926 IPR001245 GO:0004672|GO:0006468
Sebi753g00006 961 MobiDBLite consensus disorder prediction 535 561 - -
Sebi753g00006 961 PRINTS Tyrosine kinase catalytic domain signature 788 806 IPR001245 GO:0004672|GO:0006468
Sebi753g00006 961 PRINTS Tyrosine kinase catalytic domain signature 749 762 IPR001245 GO:0004672|GO:0006468
Sebi753g00006 961 PRINTS Tyrosine kinase catalytic domain signature 898 920 IPR001245 GO:0004672|GO:0006468
Sebi753g00006 961 PRINTS Tyrosine kinase catalytic domain signature 835 845 IPR001245 GO:0004672|GO:0006468
Sebi753g00006 961 PRINTS Tyrosine kinase catalytic domain signature 854 876 IPR001245 GO:0004672|GO:0006468
Sebi753g00006 961 Gene3D Phosphorylase Kinase; domain 1 668 752 - -
Sebi753g00006 961 CDD STKc_MAP3K-like 681 927 - -
Sebi753g00006 961 MobiDBLite consensus disorder prediction 376 397 - -
Sebi753g00006 961 Pfam Ethylene-responsive protein kinase Le-CTR1 147 350 - -
Sebi753g00006 961 MobiDBLite consensus disorder prediction 570 589 - -
Sebi753g00006 961 SUPERFAMILY Protein kinase-like (PK-like) 659 926 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi753g00006 Sebi-Chr753 150366 159812 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi753g00006 3 912 MAP Kinase Kinase Kinase AT1G18160 58.775 0.0 1011
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Sebi753g00006 PK_Tyr_Ser-Thr 9.3e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi753g00006 - - gmx:100816332 1430.62