Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi753g00004 ATGGGTGGTGGAGGAACTCTCGCGGATGGCATTCGTCGATTATTCCATCGTCGCTCTCCTATTAACTCTCACGTAATTGATCATCACAACAACGACGACGACGCTGTTGGATGCAATGCTAATAACAACGTTAACAATGCCAACGTTAACAACAACAAGAACATTAACTCTTCTTCTTCCTTGAATCTTCTCAAAGTACCTACACGCTCCAATTTAATACCTTCTTCCATGGATCGTAACAAAAAGGGTGCACCAGAGGCAGAGTTTTTTACTGAGTATGGAGAGGCAAATAGGTACCAGATCCATGAAGTGGTTGGAAAAGGAAGTTATGGTGTTGTGGTTTCTGCAGTTGACACTCATACTGGGGAAAAAGTTGCTATTAAGAAAATCAATGATGTTTTTGAGCATGTATCGGATGCCACAAGGATCCTAAGAGAAATTAAACTCCTCCGTTTACTCCGACATCCTGATATAGTAGAAATTAAGCACATAATGTTTCCTCCTTCACGAAGAGAGTTCAGAGATGTCTATGTTGTGTTTGAGTTGATGGAGTCTGATCTTCATCAAGTAATTAAGGCAAATGATGATCTTACTCCTGAACACTACCAATTTTTCTTGTACCAGCTTCTTCGGGGCCTGAAATATATACATACAGCAAATGTGTTTCATCGTGACTTGAAGCCAAAAAATATTCTAGCTAATGCTGATTGCAAACTAAAAATATGTGATTTTGGGCTTGCTAGAGTTTCATTTAATGAGGCTCCATCAGCTATATTCTGGACTGACTATGTTGCAACTCGGTGGTATCGTGCACCTGAACTATGTGGTTCTTTTTTCTCAAAATATACCCCCGCAATTGATATTTGGAGCATTGGATGCATATTTGCAGAAATGCTCAGTGGCAAGCCATTGTTTCCTGGGAAAAATGTGGTGCACCAATTGGATCTCATGACTGATTTGCTTGGTACTCCTCCTGCTGAATCTATTTCGAGGGCTAGAAGATACCTTAGTAGTATGCGAAAAAAGCAACCAGTTCCATTCTCCAAAAAATTTCCAAATGCAGATCCATTGGCTCTTCATTTGCTGGAGCGATTACTTGCATTTGATCCTAAAGATCGTCCAACAGCTGAAGAGGCACTATCTGAGCCTTACTTTCATGGTTTGTCAAGTGTGGACCGTGAACCATCCACTCAACCCATTTCAAAACTAGAGTTTGAGTTTGAGAGAAGAAAATTGACCAAAGATGATGTTAGAGAGTTGATTTATCGAGAGATTTTAGAGTATCATCCTCAGATGCTCCAAGAATATCTTCAGGGTGGAGAACAAACAAGCTTCATGTATCCGAGCGGGGTTGATCGGTTCAAGCGACAGTTTGCACATCTTGAGGAGCATTATGGCAAAGGTGAACGAAGCACTCCATTGCTGAGACAACATGCCTCCTTACCTAGAGAGCGAGTTCCTGCTCCCAAGGATGAGAATAATCAAAACAATGATTTTGAACAGCCAACTGGATCAAATCTTCAGAGTCCAGGGTCTGACGTGACACGTAGCCTGTTGAAGAGTGCCAGCATTAGTGGTTCAAAATGTATAGATGTGAAAAAAAGTAAAGATCCAGAGGAGGAGCCAATTCCAGAGGTCAATGATGAGACAGTGGATGAGTTGACAGAGAAGATTGCTGCTCTCCATGCTTAG 1692 0.4143 MGGGGTLADGIRRLFHRRSPINSHVIDHHNNDDDAVGCNANNNVNNANVNNNKNINSSSSLNLLKVPTRSNLIPSSMDRNKKGAPEAEFFTEYGEANRYQIHEVVGKGSYGVVVSAVDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMFPPSRREFRDVYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFNEAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLSGKPLFPGKNVVHQLDLMTDLLGTPPAESISRARRYLSSMRKKQPVPFSKKFPNADPLALHLLERLLAFDPKDRPTAEEALSEPYFHGLSSVDREPSTQPISKLEFEFERRKLTKDDVRELIYREILEYHPQMLQEYLQGGEQTSFMYPSGVDRFKRQFAHLEEHYGKGERSTPLLRQHASLPRERVPAPKDENNQNNDFEQPTGSNLQSPGSDVTRSLLKSASISGSKCIDVKKSKDPEEEPIPEVNDETVDELTEKIAALHA 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi753g00004 563 MobiDBLite consensus disorder prediction 465 517 - -
Sebi753g00004 563 Gene3D Phosphorylase Kinase; domain 1 115 431 - -
Sebi753g00004 563 FunFam Mitogen-activated protein kinase 185 408 - -
Sebi753g00004 563 MobiDBLite consensus disorder prediction 530 554 - -
Sebi753g00004 563 Pfam Protein kinase domain 99 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi753g00004 563 CDD STKc_TDY_MAPK 98 430 - -
Sebi753g00004 563 FunFam Mitogen-activated protein kinase 409 431 - -
Sebi753g00004 563 SUPERFAMILY Protein kinase-like (PK-like) 93 389 IPR011009 -
Sebi753g00004 563 Gene3D Transferase(Phosphotransferase) domain 1 185 408 - -
Sebi753g00004 563 ProSiteProfiles Protein kinase domain profile. 99 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi753g00004 563 SMART serkin_6 99 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi753g00004 563 ProSitePatterns MAP kinase signature. 134 237 IPR003527 GO:0004707|GO:0005524|GO:0006468
Sebi753g00004 563 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 97 438 - -
Sebi753g00004 563 FunFam Mitogen-activated protein kinase 89 193 - -
Sebi753g00004 563 MobiDBLite consensus disorder prediction 492 517 - -
Sebi753g00004 563 ProSitePatterns Protein kinases ATP-binding region signature. 105 129 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi753g00004 Sebi-Chr753 35826 41249 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi753g00004 1 562 MAP Kinase Gene Family AT1G73670 71.477 0.0 820
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Sebi753g00004 Pkinase 1.3e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi753g00004 - - gmx:100776784 891.338