Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi752g00007 ATGGGACATGTATATGAAGATAGGCTATATGTGTCCCTAGATGAGTTATGTTTTAATGCTGAGAATGGTAGCAACAGGGGAAGGATGGGTAGGAAGAACTATGATGATGACACAAGGATGAACAAGGCAACCATTATTGATGATGCTATCACATACATTCAACAGCTACAAGATGAAGTCCAGAATCTCAGCCAAGAGCTTCATGAAATGGAAGCAACCACAGAGGAAATAGAAGAGCCAAAGATAGTAGAATTTGATGCTGCTGAAGAGATGAAGAAATGGGGGATACAGGAAGAGATTGAGGTGACAAGAATGGATGGGAATAAACTTTGGGTCAAGATGATCATTGAAAACAAGAGGGGAAGGTTCAATAAATTAATGGAGACCATGCATACTTTTGGCATTGAACTGATACACACCAATGTTACAACCATGAAAGGAGCATTTCTGATTACAACATGCATACAGGGCATGAATGGTGAAACACTTGAAGTTGATAAAATCAAACAATTGATACCAGATATTATCAGAGTCATTTAG 540 0.3852 MGHVYEDRLYVSLDELCFNAENGSNRGRMGRKNYDDDTRMNKATIIDDAITYIQQLQDEVQNLSQELHEMEATTEEIEEPKIVEFDAAEEMKKWGIQEEIEVTRMDGNKLWVKMIIENKRGRFNKLMETMHTFGIELIHTNVTTMKGAFLITTCIQGMNGETLEVDKIKQLIPDIIRVI 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi752g00007 179 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 37 75 IPR036638 GO:0046983
Sebi752g00007 179 Coils Coil 46 76 - -
Sebi752g00007 179 Gene3D - 13 77 IPR036638 GO:0046983
Sebi752g00007 179 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 38 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi752g00007 Sebi-Chr752 219128 220254 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi752g00007 38 177 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G21330 39.189 2.14e-29 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi752g00007 - - gmx:100793107 194.897