Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi751g00027 ATGGCCAGCAGCAACTGTTATATGTTCCCTTCACAAGAAAACCAAAATGTCCTCACCGCCTATTACCCTCTTTCTTTTTCTTCATATGGTGTGGTTTCAATTGTTTCTTCATCTCAAGAGAGTAACTATGCCTGCAAAACCTCTGTGATGGAGAATAGTAGCAATACTGAAGGATGGACTTTTCCATTTATGAGGGAATGCCTTTCCAAAAGCTTTGAGGAACAACATCCCAACATGGATGATGTGGAGGGTTGTAATAATGGTAATTCTGATTGCAGTGATGGGATTGGGGAAAACAACCATAATGCTAACTCCAATGAAGAGAACCCTAATGAGAATCCTGTCAGTGGCAAAGAGGTAGATAGTGGACAATCCAAACTCTGTGCAAGAGGACATTGGAGACCTGCAGAAGATTCCAAGCTCAAGGAACTTGTGGCTCTTTATGGTCCTCAAAACTGGAACCTCATTGCTGAAAAGTTGGAAGGAAGATCAGGCAAGAGTTGTAGGTTGAGATGGTTCAACCAGTTGGACCCAAGGATCAACAGGAGAGCTTTCAGTGAAGAAGAGGAAGAAAGGCTAATGCAGGCACATAGAATTTATGGCAACAAATGGGCCATGATTGCTAGGCTTTTCCCTGGAAGAACAGATAATGCTGTCAAGAATCACTGGCATGTGATAATGGCCAGGAAGTACAGAGAGCAATCCAGTGCTTACAGGAGGAGGAGACTGGGCCAATCTGTTTACAGAAGAATGGATCAAAATCCAAACTTTATGATCTGCAGAGATACCCCAACAACAGAAACAGAACCACCATCACCCTATTTTCTCAATGGAGCACTCAGCAATAATAGTATGGCTATTTTACCATATGCTCCATCCTTCCATGGAGGTGGTGGTGGGGCTGAGTATGGCTTAAATGTTTCAACCCACATGACTGGTGGGAGAGAAGCAATGTCAAGAAATGAGCAGGCCCCCCCACATGTTGGCTTGTATACTCAACAGGCACCATATGATTTCTTCTCTGGTGCAAGAAGCAATGACATGGTGGGAGAGTCTTTCAGTCAGATCAGATGCTGGGACAGAACTAGTGATGATCAATATCATCATCAAGTATCTGGTTTCTACCCTCCTCCTTATTATCCCCAACAATATATGCCAAACAATCACAATTTTTACAGTTACTCAAATTCCTCAGCCAGGGAACCATCATCCGTAGCAGCAGAAAACAGAAACAGAGATAAAGTTGTGATGAGTGACCCCTCAGATGCTGTTTCACCTCCATTTTTTGACTTCCTCGGAGTAGGAGCCAAATGA 1314 0.4338 MASSNCYMFPSQENQNVLTAYYPLSFSSYGVVSIVSSSQESNYACKTSVMENSSNTEGWTFPFMRECLSKSFEEQHPNMDDVEGCNNGNSDCSDGIGENNHNANSNEENPNENPVSGKEVDSGQSKLCARGHWRPAEDSKLKELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFSEEEEERLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSSAYRRRRLGQSVYRRMDQNPNFMICRDTPTTETEPPSPYFLNGALSNNSMAILPYAPSFHGGGGGAEYGLNVSTHMTGGREAMSRNEQAPPHVGLYTQQAPYDFFSGARSNDMVGESFSQIRCWDRTSDDQYHHQVSGFYPPPYYPQQYMPNNHNFYSYSNSSAREPSSVAAENRNRDKVVMSDPSDAVSPPFFDFLGVGAK 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi751g00027 437 MobiDBLite consensus disorder prediction 79 126 - -
Sebi751g00027 437 FunFam MYB transcription factor 130 181 - -
Sebi751g00027 437 ProSiteProfiles Myb-like domain profile. 130 176 IPR001005 -
Sebi751g00027 437 SMART sant 129 178 IPR001005 -
Sebi751g00027 437 SMART sant 181 229 IPR001005 -
Sebi751g00027 437 Pfam Myb-like DNA-binding domain 130 176 IPR001005 -
Sebi751g00027 437 Pfam Myb-like DNA-binding domain 182 225 IPR001005 -
Sebi751g00027 437 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 177 231 IPR017930 -
Sebi751g00027 437 PANTHER MYB PROTEIN-RELATED 116 338 - -
Sebi751g00027 437 Gene3D - 183 249 - -
Sebi751g00027 437 FunFam MYB transcription factor 183 253 - -
Sebi751g00027 437 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 130 176 IPR017930 -
Sebi751g00027 437 CDD SANT 133 174 IPR001005 -
Sebi751g00027 437 MobiDBLite consensus disorder prediction 82 120 - -
Sebi751g00027 437 SUPERFAMILY Homeodomain-like 130 223 IPR009057 -
Sebi751g00027 437 CDD SANT 184 224 IPR001005 -
Sebi751g00027 437 Gene3D - 130 181 - -
Sebi751g00027 437 ProSiteProfiles Myb-like domain profile. 177 227 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi751g00027 Sebi-Chr751 415573 417289 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi751g00027 73 314 MYB Transcription Factor Family AT1G69560 52.653 3.64e-77 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sebi751g00027 Myb_DNA-binding 2e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi751g00027 K09422 - gmx:100789305 456.447