Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi751g00025 ATGGGCCGGGTAAAGCTAAAGATAAAGAGGTTGGAGAACACTAATGGTCGCCAAGCAACTTATGCTAAAAGGAAGAATGGAATCATGAAAAAAGCTACTGAATTATCTATACTATGTGATATAGATATTATACTTCTCATGTTCTCACCAAGTGGAAAGCCTTCAATATGTAGGGGGAGGCGCAG 185 0.3946 MGRVKLKIKRLENTNGRQATYAKRKNGIMKKATELSILCDIDIILLMFSPSGKPSICRGRR 61
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi751g00025 61 SUPERFAMILY SRF-like 1 55 IPR036879 GO:0003677|GO:0046983
Sebi751g00025 61 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Sebi751g00025 61 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Sebi751g00025 61 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Sebi751g00025 61 ProSiteProfiles MADS-box domain profile. 1 53 IPR002100 GO:0003677|GO:0046983
Sebi751g00025 61 Gene3D - 13 59 IPR036879 GO:0003677|GO:0046983
Sebi751g00025 61 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Sebi751g00025 61 PANTHER SERUM RESPONSE FACTOR HOMOLOG 3 54 - -
Sebi751g00025 61 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 54 IPR002100 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi751g00025 Sebi-Chr751 365522 365706 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi751g00025 1 61 Type I MADS-box Gene Family AT2G03060 81.967 1.09e-31 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Sebi751g00025 SRF-TF 6.1e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi751g00025 - - lang:109356063 110.538