Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi751g00017 ATGGAGTCCAAAACAAGCTCTGAACTCCCACCTGGCTTCAGGTTTCACCCCACTGATGAGGAACTAATTGTGTACTACCTTTGTAACCAAGCCACATCACAACCATGCCCTGCATCTATCATCCCAGAAGTGGATATCTATAAATTTGATCCATGGGAATTGCCTGATAAATCAGACTTTGGAGAAAATGAATGGTATTTCTTTAGTCCAAGAGAGAGGAAATATCCAAATGGGGTGAGGCCTAACAGAGCAACTGTGTCAGGGTATTGGAAAGCTACTGGAACAGACAAAGCAATCTATAGTGGGTCTAAGCATATTGGGGTGAAGAAAGCTTTGGTTTTTTACAAAGGTAGGCCACCAAAGGGCTTGAAGACAGATTGGATTATGCATGAGTATAGATTAATTGGATCAAGAAGACAAGCCAACAAACAAATTGGGTCCATGAGACTGGATGACTGGGTGTTGTGTAGGATCTACAAGAAGAAGAACATAGGGAAATCAGTGGAGGAAAAAGAGGAGTACCCAACAGCAGAAATCAATGTGACAGCAGCAAATGAGGAGAGTGAACAAGGAATGATGAAATTTCCAAGGACATGTTCCCTTACTAATCTTTTGGAAATGGATTACTTGGGTCCAATATCACATATATTATCTGATGGATCATATAATTCAACCTTTGAATTTCAAATGAACACTGCACATGGTGGAATAGACCCTTTTGTAAAATCACAGCTGGGTGAAATGCCTACTAATTATGCAGCAGATTCAGGGAAGTACCAAGTGAAACAGAATACCACTGTCAACCCAACCATATTTCTGAACCAAGTTAAGGGTTTCATAGATCAAAAGATTGAAGCTGGGACTCAAGAAGGTTTAGACATATACTACCCTACTGTGCCCTTATCAAATCACATACCATGCTATTTAGTATTTAGTATGAAGAGATTGTTAGAAGGACCGATATGCCTTGTCAAGGTGTCTGCTGTAGATGAGGATGAAACCGGCTATTTTGGTGCCAGGCTTACCATAGACAAACAATCTTGA 1044 0.4042 MESKTSSELPPGFRFHPTDEELIVYYLCNQATSQPCPASIIPEVDIYKFDPWELPDKSDFGENEWYFFSPRERKYPNGVRPNRATVSGYWKATGTDKAIYSGSKHIGVKKALVFYKGRPPKGLKTDWIMHEYRLIGSRRQANKQIGSMRLDDWVLCRIYKKKNIGKSVEEKEEYPTAEINVTAANEESEQGMMKFPRTCSLTNLLEMDYLGPISHILSDGSYNSTFEFQMNTAHGGIDPFVKSQLGEMPTNYAADSGKYQVKQNTTVNPTIFLNQVKGFIDQKIEAGTQEGLDIYYPTVPLSNHIPCYLVFSMKRLLEGPICLVKVSAVDEDETGYFGARLTIDKQS 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi751g00017 347 FunFam NAC transcription factor 18 165 - -
Sebi751g00017 347 Pfam No apical meristem (NAM) protein 10 134 IPR003441 GO:0003677|GO:0006355
Sebi751g00017 347 ProSiteProfiles NAC domain profile. 9 161 IPR003441 GO:0003677|GO:0006355
Sebi751g00017 347 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 8 221 - -
Sebi751g00017 347 Gene3D NAC domain 18 165 IPR036093 GO:0003677|GO:0006355
Sebi751g00017 347 SUPERFAMILY NAC domain 4 161 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi751g00017 Sebi-Chr751 246558 249555 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi751g00017 1 216 NAC Transcription Factor Family AT1G69490 68.860 2.57e-116 336
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sebi751g00017 NAM 6.1e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi751g00017 - - gmx:100170717 507.294