Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi751g00002 ATGGAAGAGACAGAGGAGTCCACCAATGCTAATCAGAAATTCACTACCAAAAGAAGAACCTTCAGGAATGGAGCCAACTCTCATGAACATCATCACTATCAGCACCATCAGTTGCTACAATACTCAACTCAGCTTGGGTCCTGCAACAATCAGAACAAGTATCAGAGGTACTACCCAGCTCTTCTTCCTCTACCTTCTCTTATACCTCTCCAACAACTACCTTCTCTTATACCTCTCCAACAACTACCTTTGACTCCACCCTTCCCTCAAAACCAGACCATCAAATCAAAAACCCATTTGCTGAAACCTCCATGCAAACTCAATAGTTCTCCTTCCTCTGATTACAAGCTCTCTGAACCACCACTTGCTCCTGCTCCAAAGGAACTTCAGCAGCAAACAAAGGCATCCTTTAAAGGAGGTGATGGTAAGAAACTGATTCCACCAAGGAAGCCACAAGCAGAAATTGTTGCAAGGAGGCCAGACTCTGGTGGCAAAGAAGGTTCTGTGATCTCTCTCCTTGCCAACCACTTTTTGGTGCAATTTGATCCATCACAAAAAATATATCATTACAATGTTGAAATTACTCCTCATCCCTCCAAGGATATTGCTAGAGTAATCAAACAGAATTTGGTAAATAACAATTCTGCTTTACTCTCGGGTGCTATTCCGGCATATGATGGGAGGAAGAATCTTTATAGCTCAATTGAATTCCAAAATGATAAGCTTGAGTTCTACATAAGCCTCCCAATCCCCACTAGCAAATTGAGATCACCATATGGAGAAATGTATGACTTGAAAGAGAAGAATGAACAGCTTAAACTGTTCCGGATAAATATCAAACTAGTCTCAAAGATTAATGGGAAGGAATTGAATAACTACTTGAGCAAAGAGGGTGATGACTGGATTCCACTTCCACAGGATTATCTACATGCTTTGGATGTAGTTCTGAGGGAAAGTCCAACAGAGAAATGTATACCTGTAGGGAGGTCATTCTATTCAAATTCAATGGGAAGAAGCAAAGATATTGGTGGAGGAGCTGTTGGATTGAGAGGCTTCTTTCAGAGTCTTAGACCAACACAACAAGGACTTGCTCTCAATGTGGATTTCTCAGTAACTGCTTTCCATGAGAGCATAGGAGTCATTCCATACTTGCAGAAACGTCTTGAGTTTCTTCGAGACCTTTCTCAAAGGAAGACAACTCAATTAACTGGTGAAGAAAGGAAGGAAGTAGAGAAGGCATTGAAGAACATAAGGGTCTTTGTTTGCCATAGAGAAACTGTTCAGAGATACCGTGTCTATGGCTTAACAGAGGAGACCACTGAAAATCTTTGGTTTGCTGACAGAGATGGCAAGAATCTGAGGCTTGTGAATTACTTTAAAGATCACTATAACTATGACATACAATTCAGGAAATTGCCATGCTTGCAAATTAGTAGGAGTAAACCTTGTTATCTCCCTATGGAGCTATGTGTGATCTGTGAAGGCCAGAAATTCCTTGGGAGATTGTCTGATGATCAGACAGCAAGAATACTCAGGATGGGCTGCCAAAGACCAGGAGAACGAAAAACCATCATTGAAGGAGTCATGAGAGGAACTGTTGGGCCTACAAGTGGCGACCAGGAAAGAGAATTCAAACTCCAAGTCTCTAGAGAAATGACAAGGTTGACTGGGAGAATTCTTCACCCTCCTAAACTAAAGCTTGGAGATGGAGGTCATGTTAGAAACCTGACTCCTTCACGGCATGACCGCCAATGGAACCTTCTGGATGGCCATGTTGTTGAAGGAGCTACAATTGAAAGGTGGGCACTAATAAGCTTTGGTGGCACACCTGAGCAGAAGTCCAATATCCCCAGATTCATAAACCAGTTATCTCAAAGGTGTGAACAATTGGGCATTTTTCTTAATAAGAACACAGTTATTAGTCCCCAGTTTGAGTCAAGCCAGGTTCTTAACAATGTCACCCTTTTGGAATCTAAGCTCAAGAGAATCCAGAGGACTGCCTCAAACAATCTCCAGCTTCTTATTTGTATAATGGAGAGAAAACACAAAGGGTATGCAGACTTGAAACGAATTGCTGAGACAAGTGTTGGTGTTGTAAGCCAATGCTGCCTGTACCCAAATCTCAGCAAGTTAAGTTCACAATTTTTGGCTAATTTGGCCCTCAAAATCAATGCCAAAGTTGGTGGATGCACAGTTGCTTTGTACAACTCACTGCCTTCTCAAGTACCAAGGCTCTTTCGGATTGATGAGCCAGTGATATTCATGGGAGCTGATGTGACACATCCTCATCCTCTTGATGATTTCAGTCCTTCTGTTGCTGCTGTTGTTGGCAGCATGAATTGGCCAACAGCAAATAAATACATTTCAAGAATAAGGTCTCAAACACATAGACAAGAAATTATCCAGGATCTTGGTGCAATGGTAGGGGAATTGCTTGATGATTTTTATCAGGAAGTAGAGAAACTCCCCAACAGAATAATTTTCTTCAGAGATGGGGTTAGTGAAACTCAATTTTATAAAGTGCTGGAAGAGGAACTGCAATCCATAAGGCATGCATGTTCAAGGTTTCCTGGTTATAAGCCTTTCATTACTTTTGCAGTTGTGCAGAAGAGGCATCACACAAGGTTGTTTCCCTTTGAAACTGACCAATCTTCCCCACAAAACCATTTCTTATATGAAAATATTCCTCCAGGGACAGTGGTTGATTCTGTGATTACTCATCCAAAAGAATTTGACTTCTATCTCTGTAGCCATTGGGGTGTGAAAGGAACAAGCAGGCCAACTCATTACCATGTCTTGTGGGATGAAAACCAGTTTACTTCTGATGAACTGCAAAAACTGGTTTACAATTTATGCTATACTTTTGTTAGGTGTACCAAGCCAATATCTTTGGTGCCTCCTGCATATTATGCCCATTTAGCAGCATACAGAGGCAGACTCTACCTTGAGCGATCAGAGTCCTTAGGTTTGTTCAGAAGTTCATCTACATTATCCAGAGCTGCTCCTCCAAAGACAACACCTCTACCTAAACTTAGTGAAAACATCAAGAAACTCATGTTCTACTGCTAG 3069 0.4151 MEETEESTNANQKFTTKRRTFRNGANSHEHHHYQHHQLLQYSTQLGSCNNQNKYQRYYPALLPLPSLIPLQQLPSLIPLQQLPLTPPFPQNQTIKSKTHLLKPPCKLNSSPSSDYKLSEPPLAPAPKELQQQTKASFKGGDGKKLIPPRKPQAEIVARRPDSGGKEGSVISLLANHFLVQFDPSQKIYHYNVEITPHPSKDIARVIKQNLVNNNSALLSGAIPAYDGRKNLYSSIEFQNDKLEFYISLPIPTSKLRSPYGEMYDLKEKNEQLKLFRINIKLVSKINGKELNNYLSKEGDDWIPLPQDYLHALDVVLRESPTEKCIPVGRSFYSNSMGRSKDIGGGAVGLRGFFQSLRPTQQGLALNVDFSVTAFHESIGVIPYLQKRLEFLRDLSQRKTTQLTGEERKEVEKALKNIRVFVCHRETVQRYRVYGLTEETTENLWFADRDGKNLRLVNYFKDHYNYDIQFRKLPCLQISRSKPCYLPMELCVICEGQKFLGRLSDDQTARILRMGCQRPGERKTIIEGVMRGTVGPTSGDQEREFKLQVSREMTRLTGRILHPPKLKLGDGGHVRNLTPSRHDRQWNLLDGHVVEGATIERWALISFGGTPEQKSNIPRFINQLSQRCEQLGIFLNKNTVISPQFESSQVLNNVTLLESKLKRIQRTASNNLQLLICIMERKHKGYADLKRIAETSVGVVSQCCLYPNLSKLSSQFLANLALKINAKVGGCTVALYNSLPSQVPRLFRIDEPVIFMGADVTHPHPLDDFSPSVAAVVGSMNWPTANKYISRIRSQTHRQEIIQDLGAMVGELLDDFYQEVEKLPNRIIFFRDGVSETQFYKVLEEELQSIRHACSRFPGYKPFITFAVVQKRHHTRLFPFETDQSSPQNHFLYENIPPGTVVDSVITHPKEFDFYLCSHWGVKGTSRPTHYHVLWDENQFTSDELQKLVYNLCYTFVRCTKPISLVPPAYYAHLAAYRGRLYLERSESLGLFRSSSTLSRAAPPKTTPLPKLSENIKKLMFYC 1022
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi751g00002 1022 Gene3D - 559 735 - -
Sebi751g00002 1022 CDD Piwi_ago-like 542 982 IPR045246 -
Sebi751g00002 1022 SMART PAZ_2_a_3 385 516 IPR003100 GO:0005515
Sebi751g00002 1022 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 150 985 - -
Sebi751g00002 1022 SMART DUF1785_2 325 377 IPR014811 -
Sebi751g00002 1022 SMART Piwi_a_2 673 983 IPR003165 GO:0003676
Sebi751g00002 1022 ProSiteProfiles PAZ domain profile. 385 494 IPR003100 GO:0005515
Sebi751g00002 1022 FunFam Protein argonaute 7 372 498 - -
Sebi751g00002 1022 SUPERFAMILY Ribonuclease H-like 658 983 IPR012337 -
Sebi751g00002 1022 ProSiteProfiles Piwi domain profile. 673 983 IPR003165 GO:0003676
Sebi751g00002 1022 Pfam Argonaute linker 1 domain 326 375 IPR014811 -
Sebi751g00002 1022 Pfam PAZ domain 388 510 IPR003100 GO:0005515
Sebi751g00002 1022 MobiDBLite consensus disorder prediction 96 116 - -
Sebi751g00002 1022 Pfam Piwi domain 674 980 IPR003165 GO:0003676
Sebi751g00002 1022 Gene3D paz domain 371 498 - -
Sebi751g00002 1022 Pfam N-terminal domain of argonaute 170 316 IPR032474 -
Sebi751g00002 1022 FunFam protein argonaute 10-like 743 1022 - -
Sebi751g00002 1022 SUPERFAMILY PAZ domain 372 530 IPR036085 GO:0005515
Sebi751g00002 1022 CDD PAZ_argonaute_like 381 493 - -
Sebi751g00002 1022 FunFam Argonaute 10 559 735 - -
Sebi751g00002 1022 Gene3D - 745 1022 IPR036397 GO:0003676
Sebi751g00002 1022 MobiDBLite consensus disorder prediction 96 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi751g00002 Sebi-Chr751 49363 54109 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi751g00002 112 1022 Eukaryotic Initiation Factors Gene Family AT1G48410 40.985 0.0 647
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi751g00002 K11593 - gmx:100797755 1881.69