Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi750g00007 ATGGTGGAAGCAAAGATATGCCAGAAGTACAGCAAAACATGGTCAGGGTGGTGTGGCAACTCTAACCACTGTGACAACCAGTGCAAGAAATGGGAAGGTGCAAAGTTTGGATCATGTCACTATGATTCACGTGGACGGGCTTGTTTCTGTTACTTCAATTGTCCAGGTTTATGTGCCAAGCGCAGCAAAACATGGTCTGGGATATGTATCAGCTCCAAAAACTGTGACAAGCAATGTAGGACTAAGGAAGGTGCCAGTCACGGAGCTTGTCATGGCAACCTCTCTGGACGGGCTTGTGACTGTTACTTCAAATGTTAA 318 0.4623 MVEAKICQKYSKTWSGWCGNSNHCDNQCKKWEGAKFGSCHYDSRGRACFCYFNCPGLCAKRSKTWSGICISSKNCDKQCRTKEGASHGACHGNLSGRACDCYFKC 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi750g00007 105 SMART gth_4 6 54 IPR003614 GO:0006952
Sebi750g00007 105 SMART gth_4 57 105 IPR003614 GO:0006952
Sebi750g00007 105 PANTHER DEFENSIN-LIKE PROTEIN 1 3 51 - -
Sebi750g00007 105 SUPERFAMILY Scorpion toxin-like 57 105 IPR036574 -
Sebi750g00007 105 ProSitePatterns Gamma-thionins family signature. 5 28 IPR008176 GO:0006952
Sebi750g00007 105 Pfam Gamma-thionin family 5 54 - -
Sebi750g00007 105 Pfam Gamma-thionin family 57 105 - -
Sebi750g00007 105 Gene3D - 6 54 IPR036574 -
Sebi750g00007 105 Gene3D - 57 105 IPR036574 -
Sebi750g00007 105 SUPERFAMILY Scorpion toxin-like 4 54 IPR036574 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi750g00007 Sebi-Chr750 144368 144685 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi750g00007 2 54 Plant Defensins Gene Families AT1G19610 60.377 2.85e-19 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi750g00007 - - mtr:25500300 119.398