LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sebi74g00053	ATGGTGACGGCGTCTTCCATAGTCCTCACGGTCATGGGTGCTGCCCCTTGCTTGCACGAGAGTCATGGAGTTCATGTATGTCACAAATGTGGATGGCCTTTCCCGAACCCACACCCAAGTGCCAAACATAGGCGTGCTCACAAGAAAATCGGTGGAACCATAGAAGGGTACAAACTGTTAGTTTCAGAGAGCCAAACCCATTCCGTCTCTTCAGATGATGAACAACTTTCTGATGATGATCGCAACACAAAGGCAAGTGGCCTACTATTTACACCGGATTATTATGCTATGTTTCACATTAGTAGTACCAAGAATGAGAATATTTTCTTTTCTGTCTATATTGATGTCCAAAACGCCTTGGATGCTCATAACAATGAGAAAGATTGTGTTGGAACCGGAGAAAATTTAAATAGGTCAGGTGATGAGGTGTTTTTAGATGCAATTGCAAACTTTTCTGATGGTGGACTAAGTCCAGGAAATAAGGAGAGCTTAAGAGATAGTTTGGACTCAGCTACTGATATGGAAACAGTTGACAGAAAATATCCAGACATTTCAGGGTATTCTGAGGACAATGATTTTAATGCTGGAGACGTTAATCAATTAATTGTCAAGTCAAGAGATGATGGCAAAATGCAAGATCCTAATATTTTGCAGAGTGAAAGGGGTGAGGATGGAAAAATGCTAGAGTTAAAAGGTCAACTGTTAAACTCTTCTGTGAATCCATTATCAAATAGCATTACAGATTTGAGGACCAAAGAATTCACTGTTGCACATAGTGATGATTGCTTTGGTTTGTCAAGTGACTCAGTTCCTAGCAAAGCTGGAGCTGCACCAGCTGGATTGCTAGAAAATAAGATCTTTGCTGGAGAAAATATGAGAGATTGCAGTTTAACATCTGTTGCAAAGGAGACTGATGTGAAAGCAAAGGGTGAGATCAAATCAGACAGAGACATGGCTGAGATTGTGGTCTCTTCCTATATGAGTGAAACATGTGAGGGAGTAACTGAATTAGCAGTTAGTAATGTGGTTAACTCGGACTGTCAAGTGGCTAGTGGAGCTTTAATCTGA	1068	0.4082	MVTASSIVLTVMGAAPCLHESHGVHVCHKCGWPFPNPHPSAKHRRAHKKIGGTIEGYKLLVSESQTHSVSSDDEQLSDDDRNTKASGLLFTPDYYAMFHISSTKNENIFFSVYIDVQNALDAHNNEKDCVGTGENLNRSGDEVFLDAIANFSDGGLSPGNKESLRDSLDSATDMETVDRKYPDISGYSEDNDFNAGDVNQLIVKSRDDGKMQDPNILQSERGEDGKMLELKGQLLNSSVNPLSNSITDLRTKEFTVAHSDDCFGLSSDSVPSKAGAAPAGLLENKIFAGENMRDCSLTSVAKETDVKAKGEIKSDRDMAEIVVSSYMSETCEGVTELAVSNVVNSDCQVASGALI	355

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sebi74g00053	355	ProSitePatterns	Zinc finger C2H2 type domain signature.	27	47	IPR013087	-
	Sebi74g00053	355	PANTHER	PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN	19	343	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sebi74g00053	Sebi-Chr74	1789764	1791577	Dispersed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	C2H2	Sebi74g00053		None	None	None

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sebi74g00053	-		-	gmx:100820280	313.538