LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sebi74g00026	ATGTCTCACAAAAAGGATACTAATTATTCTTCATTACCCATTAGCTCATACCTAGAATTGCAGCCTCATAATGATTCCCCAACCACTTTACAAAGGCTATCTTTTGATGAAACTGGGAAAGGGGGGTATTTGGAATCCAAGGTTGTCGATGACGACGACGACGATGATTTTGAAATTGACATCGATAATTATCCTCTTGTTGTTGTTGGGCCTAATGAAAGTTCTGGGGTACCTGGTGCTGTGTTCAATTTGACCACCACGATTATTGGGGCAGGGATCATGGCCCTCCCTGCCACCATGAAGGTTCTCGGAGTGGTTTTGGGGATTGTGTTGATAATTATTATGGGGATTTTGTCAGAAATTAGTGTGGAATTGTTAGTGCGTTTTTCTGTTTTGTGTAAAGCATCCTCTTATGGGGAGGTTGTTCAACATGCTATGGGAAAGCCTGCTAGGATTTTGTCTGAAATCTGTATTATAATGAATAATGCTGGTGTTTTGGTGGTTTACTTGATAATCATGGGGGATGTTATGTCTGGTTCTGTTCATCATATGGGGGTTTTTGATCAGTTATTGGGAAATGGGGTGTGGGATCAGAGAAAGCTTGTGGTTTTTGTTGTTATGGTGGTTTTTCTTGCACCCCTTTGTTCACTTGACAAGATTGATTCATTGAGTTTGACTTCAGCTGCCTCAGTTGCTCTTGCTGTCATCTTTGTTGTCATTGCTTTCATTGTTGCTTTCATTAAGCTTGTTGAAGGACGGATTGATACTCCAAGGATGACTCCTGATTTTAGCTCAAAAAAGGCCATATTGGATTTGCTAGTGGTGATTCCTATCATGACCAATGCATATGTTTGCCATTTTAATGTGCAGCCAATATACAATGAACTTCAAGGAAGGTCTCCTCAGAAGATGAACCGAGTAGGAAGGATCACCACAATTTTGTGCATCCTAGTTTATGCTTCCACAGCTCTGTCAGGTTACCTACTATTTGGGGATGATACAGAGTCTGATGTTCTGACTAATTTTGATAAGGATCTTGGAATTCGGTTTAGTTCAGCATTGAACTATATTGTCCGGGTTGGCTACATTCTCCATTTGATACTTGTCTTCCCTGTTATTCATTTCTCCCTACGCCAAACAGTGAATGCCTTGTTGTTTGAGAAATCACCTCCCCTATCAGAAAGTAGGAAGAGATCACTGGGGTTGACTTTTGTTCTGTTGGTACTCATATATATTGGCTCTACCATGATTCCAAACATTTGGACAGCTTTTAAGTTCACTGGGGCAACAACAGCTGTTTCATTGGGTTTTATATTTCCATCTCTTGTTGCATTAAGATTAAGTCATAAGGGGGATTTGAGCCATGGAGAATGGATTATATCATGGGTGTTGTTGATATTGGCTGTGATTGTTAGCATAGTAGGAGTTGTTGGCAATGTCTATAGCATCCAGAGTAAGTCTCAATGA	1467	0.4035	MSHKKDTNYSSLPISSYLELQPHNDSPTTLQRLSFDETGKGGYLESKVVDDDDDDDFEIDIDNYPLVVVGPNESSGVPGAVFNLTTTIIGAGIMALPATMKVLGVVLGIVLIIIMGILSEISVELLVRFSVLCKASSYGEVVQHAMGKPARILSEICIIMNNAGVLVVYLIIMGDVMSGSVHHMGVFDQLLGNGVWDQRKLVVFVVMVVFLAPLCSLDKIDSLSLTSAASVALAVIFVVIAFIVAFIKLVEGRIDTPRMTPDFSSKKAILDLLVVIPIMTNAYVCHFNVQPIYNELQGRSPQKMNRVGRITTILCILVYASTALSGYLLFGDDTESDVLTNFDKDLGIRFSSALNYIVRVGYILHLILVFPVIHFSLRQTVNALLFEKSPPLSESRKRSLGLTFVLLVLIYIGSTMIPNIWTAFKFTGATTAVSLGFIFPSLVALRLSHKGDLSHGEWIISWVLLILAVIVSIVGVVGNVYSIQSKSQ	488

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sebi74g00026	488	Pfam	Transmembrane amino acid transporter protein	75	478	IPR013057	-
	Sebi74g00026	488	PANTHER	AMINO ACID TRANSPORTER	73	471	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sebi74g00026	Sebi-Chr74	614954	616420	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sebi74g00026	6	488	Amino Acid or Auxin Permease AAAP Family	AT1G80510	71.516	0.0	662

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sebi74g00026	-		-	gmx:100813328	741.495