Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi74g00010 ATGGACGGCGATGACTCGTTCAAGTTCAACCAATGCCAAATGAATGCTTTTTTGAACATTGATGATGAAGATCAGCATCGCGGAGACATAAGGCAGCAGCAAGTAAACTTGTCTTGTAGAACTGAAACACAATCTCATCACTCTCTGCAGTACTACCCTTCTTGCTTAGGCTTCAAGGGTCAGTCTTCGCATAGTTCGAATGTAGTTTGCTGGGGACCATCGCTGGAGGAATTAGGCCATTCTTCCTCAAAAAGGACCCTAAGCTTTGAACCCAGTGTGACCCAAGGACAAGGAAGAAAGAGGGGTAGAAGCTCTTCAGAGATACAGGGTCACATAATGGCTGAGAGAAAAAGGAGGCAGGAAATGGCAGAGAGATTCATAACACTTTCAGCTATTATACCTGGCTTGAAGAAGATAGACAAGGCCTCTGTTCTTCGGGAAGCTATTAATTACGTGAAACAACTTAAAGAACGCATTGCAGTGCTGGAAGAAGAAAGCAAGCAAAAAAGTACCACGTCAATAATCTCTATTAAGAAATCTCACTCTCATCCACTTTCCGAAATAAACACCTTGGGTTCCAACAATCAAATGCTCCCTCATGTTGAAGCAATAGGCTTAGAGCCAGAAAAACAACTACTTATTAGAGTCCATTGTGAGAAACGAAATGGCATCTTGCTCAAAATATTGACCCTACTTCAAAATATACACCTCTCTATTGCCAGTAGCAGCGTACTGCCATTTGGGAAAAATACTCTCAGCATTACCATTATTGCTCAGGTTGAGTAG 786 0.4224 MDGDDSFKFNQCQMNAFLNIDDEDQHRGDIRQQQVNLSCRTETQSHHSLQYYPSCLGFKGQSSHSSNVVCWGPSLEELGHSSSKRTLSFEPSVTQGQGRKRGRSSSEIQGHIMAERKRRQEMAERFITLSAIIPGLKKIDKASVLREAINYVKQLKERIAVLEEESKQKSTTSIISIKKSHSHPLSEINTLGSNNQMLPHVEAIGLEPEKQLLIRVHCEKRNGILLKILTLLQNIHLSIASSSVLPFGKNTLSITIIAQVE 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi74g00010 261 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 106 155 IPR011598 GO:0046983
Sebi74g00010 261 Gene3D - 97 171 IPR036638 GO:0046983
Sebi74g00010 261 MobiDBLite consensus disorder prediction 82 103 - -
Sebi74g00010 261 Pfam Helix-loop-helix DNA-binding domain 111 156 IPR011598 GO:0046983
Sebi74g00010 261 SMART finulus 112 161 IPR011598 GO:0046983
Sebi74g00010 261 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 111 171 IPR036638 GO:0046983
Sebi74g00010 261 PANTHER BHLH TRANSCRIPTION FACTOR 44 261 - -
Sebi74g00010 261 MobiDBLite consensus disorder prediction 82 108 - -
Sebi74g00010 261 Coils Coil 145 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi74g00010 Sebi-Chr74 350378 358032 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi74g00010 96 260 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22760 41.573 2.13e-34 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Sebi74g00010 HLH 2.4e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi74g00010 - - gmx:100809351 190.66