Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi74g00009 ATGGAAAAGTCATGGGAAAATTGGCCTCTTCATATGGAAATCGGTCATCATGATAAGGATCTGTTCCAGCAGTGCCAAAGTGGCGATGATGACGAGTTCCTCAGAGACATCCTGCAGCAACCAGCTTTGTCTGCTGAAAGTGAAAGCCAATCTTTTACCCATAATAACACCTTCACCGCCACAGTTGCCGGAGCCACCGTGACCACCACCACCACCGACGGCAGCAGTTTATCCTCGGATGAGATAATCTGCTCCGATTTTCCTGGAAAAAAGCCTCGTCTCTCGACAGCTCCGAGGACATACATTTTGTCCTTCGATAACTCCACAATAATACCAGCAACACCAGAACCTGTCGGCCAGGGTACGGGTACCCGTTCTTCTAAATCTAATTCGCCTCTGCCATCGAAAAAACGGACACTGGAAAATCCAAACAGTGAACCGAAACCAAGGGGTAACCAAGGGGAAAAGAAGAGTAGAAGCGATTCGCAGATTATGGATCACATATTGGCGGAGAGAAAAAGGAGACAGGAACTGACAGAGAAATTCATAGCACTATCAGCTACTATCCCGGGCTTGAAGAAGACGGACAAGACTTCTATACTTCGCGAAGCTATCAGTTATGTGAAAGAACTTCAAGAACGTGTGACGGAGCTAGAACAGCGAAACAAGAGAGGCAAAGAATCAAAGGTAATCCTGAAGAAGACTAATGATGATCCGTGTGCAAATGAAGACACGACTTCAAGTGAAACAAATTCTGATGAGGATTGCTGTAGACCCAGCCGATTGCTCCCTGATGTTGAAGCAAGAGTGTTGGAGAATGAAGTACTCATTGAGATCCATTGTGAGAAGGAAAATGGCATACAGCTCAAGATATTGGAGCTACTTGAAAATCTTCATCTCTATGTCACTGGCAGCAGTGTGTTGCCGTTTGGGAATTCAACTCTTGGCATTACTATCATCGCTCAGATGGGTGACGGTCACAGAATGACGGTCAACGTCAACGATCTAGTGAAAAACCTAAAGCAAGTGCTAATGAATCGCAAATACAAATAG 1053 0.453 MEKSWENWPLHMEIGHHDKDLFQQCQSGDDDEFLRDILQQPALSAESESQSFTHNNTFTATVAGATVTTTTTDGSSLSSDEIICSDFPGKKPRLSTAPRTYILSFDNSTIIPATPEPVGQGTGTRSSKSNSPLPSKKRTLENPNSEPKPRGNQGEKKSRSDSQIMDHILAERKRRQELTEKFIALSATIPGLKKTDKTSILREAISYVKELQERVTELEQRNKRGKESKVILKKTNDDPCANEDTTSSETNSDEDCCRPSRLLPDVEARVLENEVLIEIHCEKENGIQLKILELLENLHLYVTGSSVLPFGNSTLGITIIAQMGDGHRMTVNVNDLVKNLKQVLMNRKYK 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi74g00009 350 Coils Coil 201 228 - -
Sebi74g00009 350 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 162 211 IPR011598 GO:0046983
Sebi74g00009 350 PANTHER BHLH TRANSCRIPTION FACTOR 47 346 - -
Sebi74g00009 350 Gene3D - 161 234 IPR036638 GO:0046983
Sebi74g00009 350 MobiDBLite consensus disorder prediction 108 163 - -
Sebi74g00009 350 MobiDBLite consensus disorder prediction 236 255 - -
Sebi74g00009 350 Pfam Helix-loop-helix DNA-binding domain 167 212 IPR011598 GO:0046983
Sebi74g00009 350 SMART finulus 168 217 IPR011598 GO:0046983
Sebi74g00009 350 MobiDBLite consensus disorder prediction 108 149 - -
Sebi74g00009 350 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 163 226 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi74g00009 Sebi-Chr74 320798 326135 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi74g00009 158 346 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 46.114 4.64e-41 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Sebi74g00009 HLH 3.7e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi74g00009 - - aprc:113856039 385.185