Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi74g00005 ATGGAGAGTGGAGACCAAATATCATCGCTCATGGCAGACCCCACTTCATATCCGGTCTCCCACTTTCCAGTGGAGCAGTCATGGGACACTTTGCATCTTCACATGGAAATGGGTGATGATGAAAAGCATCTATTTGAACAGTGCCACAATAGTGATGATGAAGAGTTCTTGAGAGACATCCTGCAGCAACCAGCTTTGTCTTTTGATGAATGTCAAAGTGAATCTTTTGTCCAAAATAACAACTTCACTGCCACAACCACAACAAATGAGATGGCGTGCTCCTCTCAGAAAAGGCTTCATCCCTCATCCTCGTCTCCAAAGACATTCATTCTGTCTTTCGATAAATGTAAAATAATACCAGCTTCACCAGAACCTCTCCTTGGTCATGAACGAAAGGGTGGGAAGGGTACAAGTTTTTCTAAATCTAATTCATCAACTGTGAAATCAAAAAAAGGGACCCTGGAACTGGAAAATCTCAAGCTTGGACCAAAACAGAGTGCCACCCAAGGAGCTGGAAAGCAAAGTAGGAGCGGTTCCAAAACTGTGGATCACCTTATTGCAGAGAGAAAAAGGAGACAGGACTTGGCAGAGAAGTTCATAGCACTTTCATCCATTGTTCCGGGCTTGAAGAAGATAGACAAGACTTCTATAGTATGTGAAACTATCAGTTATGTGAAACAACTTCACGAGCGTGTGACGGAGCTAGAACAACCGCGAGACAATACAGGCAATGAATCACTGGCATACCTCAAGAAGACTAGTCTGTGTGGTGCAAATGAAACAAAGTCTGAGGATTGCTGTAGGCCCAGTGAATTGCTCCCTGATGTTAAAGCAAGAGTGTTGAAGAATGAGGTAATTATTTGGATCCATTGTAAGAAGGAAAATGGCATTGAGCTAAAAATATTGGACCTGCTTGAAAATCTTCATTTGTGTGTCACCGGCAGCAGCGTATTGCCGTTTGGGAATTCAACTCTTAACATTACTATACTCGCCCAGATGGGTGACGCATACACAATGACGGTGGTTGGTCTCGTGGAAAACGTAAGGCAAGTGTTATTGAATGACATAAGCAGCAATATCGATTAG 1086 0.43 MESGDQISSLMADPTSYPVSHFPVEQSWDTLHLHMEMGDDEKHLFEQCHNSDDEEFLRDILQQPALSFDECQSESFVQNNNFTATTTTNEMACSSQKRLHPSSSSPKTFILSFDKCKIIPASPEPLLGHERKGGKGTSFSKSNSSTVKSKKGTLELENLKLGPKQSATQGAGKQSRSGSKTVDHLIAERKRRQDLAEKFIALSSIVPGLKKIDKTSIVCETISYVKQLHERVTELEQPRDNTGNESLAYLKKTSLCGANETKSEDCCRPSELLPDVKARVLKNEVIIWIHCKKENGIELKILDLLENLHLCVTGSSVLPFGNSTLNITILAQMGDAYTMTVVGLVENVRQVLLNDISSNID 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi74g00005 361 SMART finulus 185 234 IPR011598 GO:0046983
Sebi74g00005 361 Gene3D - 172 244 IPR036638 GO:0046983
Sebi74g00005 361 MobiDBLite consensus disorder prediction 162 181 - -
Sebi74g00005 361 PANTHER BHLH TRANSCRIPTION FACTOR 56 353 - -
Sebi74g00005 361 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 179 245 IPR036638 GO:0046983
Sebi74g00005 361 MobiDBLite consensus disorder prediction 124 183 - -
Sebi74g00005 361 Pfam Helix-loop-helix DNA-binding domain 183 229 IPR011598 GO:0046983
Sebi74g00005 361 MobiDBLite consensus disorder prediction 137 152 - -
Sebi74g00005 361 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 179 228 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi74g00005 Sebi-Chr74 214969 218468 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi74g00005 165 356 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 40.816 5.85e-38 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Sebi74g00005 HLH 3.6e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi74g00005 - - aprc:113856039 298.13