Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi749g00019 ATGGTTTCAAGGTCATATTCTAACTTGTTAGAACTTACTTCCTGTGACTCTCCAACTTTTGGTCGTGAGAAGAAAAGGCTTCCTCGAGTGGCAACTGTTGCTGGAGTACTGTCTGAACTAGATGATGAGACTAGCAACAGTGTTGGCTCTGATGCTCCCTCCTCCATCTCTCAAGAGAGGATGATCATTGTTGGTAACCAGCTTCCATTAAGGGCAAACAGAAAAGAGAATGGTACTTGGGAATTCAACTGGGATGAGGACTCACTTCTTTTACAGCTGAAAGATGGTCTTGGAGATGATGTGGAAACTATCTATATTGGTTGTCTTAAAGAAGAAATTGAGCCAAGTGAACAAGATGATGTTGCTCAATACTTGCTTGACACTTTCAAATGTGTACCTACGTTCCTCCCTCCTGAGCTTTTTAGTAAATTCTATCATGGATTCTGCAAACAACATTTATGGCCTTTATTTCACTACATGCTTCCACTGTCACCTGATCTTGGTGGTCGGTTTGATAGATCCCTTTGGCAGGCTTATGTTTCTGTGAACAAGATTTTTGCTGATAAAGTGATGGAAGTCATTAGCCCTGATGATGACTTTGTGTGGGTTCATGACTACCATTTGATGGTTCTTCCAACATTTTTGAGAAAGAGATTTAACAGGGCGAGGCTAGGATTCTTCCTCCATAGTCCATTTCCTTCCTCTGAGATATATCGAACCCTTCCTGTTAGGGATGAACTTCTTAGAGCTCTTCTGAATTCTGACCTTATTGGGTTTCATACTTTTGATTATGCGAGGCATTTCCTCTCTTGTTGCAGTAGAATGCTTGGGATTTCTTATCAATCCAAGCGAGGCTACATTGGTCTTGAGTACTATGGAAGAACTGTAAGCATTAAGATTCTTCCTGTTGGTATTCATATAGGTCAGATTCAATCAGTTATGAATCTCCCTGAGACAGAAACCAAGGTTGCAGAGTTACAAAGTCAGTTCAGAGGTCAAACTGTGATGCTTGGGGTGGATGACATGGATATCTTCAAAGGAATCAGCTTAAAACTCTTGGCCATGGAACAGTTGCTTTTACAACATGCTGATAAGAGGGGTAAAGTTGTTCTGGTCCAAATTGCAAACCCTGCTAGAGGCCGGGGAAAGGATGTCCAGGAAGTGCAGAGTGAAACTTATGCCACAGTGAAAAGGATAAATGATACATTTGGAAGGCCTGGATACACACCTGTAGTCTTGATTGATACACCACTTCAAAGTTATGAGCGAATTGCTTATTATGTGATTGCAGAATGTTGTCTTGTTACAGCAGTGAGAGATGGGATGAACCTTATACCCTATGAGTATATCATATGTAGACAAGGAAGTGAGAAGATAGATGAGATTTTAGGGGAAAATCCATTTGCCCAAAAGAAAAGCATGCTGGTAGTGTCTGAGTTCATTGGGTGCTCCCCATCATTAAGTGGGGCAATTCGAGTAAATCCATGGAATATAGATGCTGTTGCTGAAGCTATGGATTCTGCCCTAATGGTACCAGAGTCTGAAAAACAGATGCGGCATGAGAAGCATTATAGGTATGTTAGTACACATGATGTTGCATATTGGGCGCGCAGCTTCTTGCAGGATCTGGAAAGGGCATGCAGAGATCATTTGAGAAGGAGATGCTGGGGAATTGGTTTTGGTTTAGGGTTTAGAGTAATTGCTTTGGATCCAAACTTTAGAAAGCTATCTGTGGAACATATTGTTTCAGCTTATAAGAGGACCAAGCACCGAGCAATTCTTTTGGATTATGATGGTACTATGGTACAGCCTGGATCAATTAGTACAACACCAAATGCTGAAGCTGTTGGCATCTTGAAAAGCTTGTGCAAGGACAACAAGAATTGTGTTTTCATTGTAAGTGGAAAGGAGAGAAAGACTCTTACTGAATGGTTTTCTTCTTGTGAAAGGCTAGGAATTGCTGCAGAACATGGTTATTTTGTGAGGACAAATCATAATGAAGAATGGGAAGCTTGTGTTTCTGTGCCCGATTTTGACTGGAAACAGATTGCCGAGCCTGTTATGCAGTTATACACGGAGACAACTGATGGTTCTAACATAGAGACCAAAGAAAGTGCTCTTGTTTGGAACTATGAGTTTGCAGATCGAGATTTTGGTTCATGCCAGGCTAAGGAGCTTTTTGATCATCTGGAAAGTGTTCTTTCCAATGAGCCTGTTTCTGTTAAAAGTGGTCCAAACATTGTTGAAGTTAAACCTCAGGGTGTGACTAAAGGTATTGTAGCAGAACGTCTTCTGTTAACAATGCAACAAAAGGGAGTGATTCCAGATTTTGTTCTATGCATTGGGGATGACAGATCAGATGAGGACATGTTTGGGGTAATAGCGAGTGCAAGGGCATCACTATCCCCTGTTGCAGAGGTGTTTCCTTGCACTGTTGGTCAGAAACCTAGCAAGGCAAAGTATTACTTGGAAGACACAAGTGAGATTTTGAGAATGTTGCAGGGCCTTGCCAATGCTTCTGAGCATTCTGCTGCTAGAAGTTATTCTCATTCAGCTTTTCCTAATCTGTAG 2571 0.4146 MVSRSYSNLLELTSCDSPTFGREKKRLPRVATVAGVLSELDDETSNSVGSDAPSSISQERMIIVGNQLPLRANRKENGTWEFNWDEDSLLLQLKDGLGDDVETIYIGCLKEEIEPSEQDDVAQYLLDTFKCVPTFLPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRARLGFFLHSPFPSSEIYRTLPVRDELLRALLNSDLIGFHTFDYARHFLSCCSRMLGISYQSKRGYIGLEYYGRTVSIKILPVGIHIGQIQSVMNLPETETKVAELQSQFRGQTVMLGVDDMDIFKGISLKLLAMEQLLLQHADKRGKVVLVQIANPARGRGKDVQEVQSETYATVKRINDTFGRPGYTPVVLIDTPLQSYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGSEKIDEILGENPFAQKKSMLVVSEFIGCSPSLSGAIRVNPWNIDAVAEAMDSALMVPESEKQMRHEKHYRYVSTHDVAYWARSFLQDLERACRDHLRRRCWGIGFGLGFRVIALDPNFRKLSVEHIVSAYKRTKHRAILLDYDGTMVQPGSISTTPNAEAVGILKSLCKDNKNCVFIVSGKERKTLTEWFSSCERLGIAAEHGYFVRTNHNEEWEACVSVPDFDWKQIAEPVMQLYTETTDGSNIETKESALVWNYEFADRDFGSCQAKELFDHLESVLSNEPVSVKSGPNIVEVKPQGVTKGIVAERLLLTMQQKGVIPDFVLCIGDDRSDEDMFGVIASARASLSPVAEVFPCTVGQKPSKAKYYLEDTSEILRMLQGLANASEHSAARSYSHSAFPNL 856
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Sebi749g00019 856 NCBIfam trehalose-phosphatase 589 837 IPR003337 GO:0003824|GO:0005992
Sebi749g00019 856 Gene3D Glycogen Phosphorylase B; 53 311 - -
Sebi749g00019 856 Gene3D - 590 703 IPR023214 -
Sebi749g00019 856 Gene3D - 716 852 IPR023214 -
Sebi749g00019 856 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 590 707 - -
Sebi749g00019 856 CDD HAD_TPP 592 828 - -
Sebi749g00019 856 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 60 548 - -
Sebi749g00019 856 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 35 838 IPR001830 GO:0003824|GO:0005992
Sebi749g00019 856 NCBIfam HAD-IIB family hydrolase 593 793 IPR006379 -
Sebi749g00019 856 Gene3D Glycogen Phosphorylase B; 312 528 - -
Sebi749g00019 856 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 720 849 - -
Sebi749g00019 856 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 53 311 - -
Sebi749g00019 856 Pfam Glycosyltransferase family 20 60 544 IPR001830 GO:0003824|GO:0005992
Sebi749g00019 856 CDD GT20_TPS 60 544 IPR001830 GO:0003824|GO:0005992
Sebi749g00019 856 SUPERFAMILY HAD-like 591 837 IPR036412 -
Sebi749g00019 856 Pfam Trehalose-phosphatase 594 827 IPR003337 GO:0003824|GO:0005992
Sebi749g00019 856 FunFam Alpha,alpha-trehalose-phosphate synthase 313 528 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Sebi749g00019 Sebi-Chr749 298197 301580 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi749g00019 1 855 Trehalose Biosynthesis Gene Families AT4G17770 78.089 0.0 1425
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi749g00019 K16055 - gmx:100782799 1602.8