Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi749g00012 ATGGAGGCGCAACCGCAACCTCCAACACCTTCCACTGCCCCGCCACTCTCCTCGGTGGCTCCGCCGCTGCCACCACCACACCTCAACTATCCCGATTCCGTTGATTCCTCCCCACGCTCCCGCAACACCGACTCATGGGACGAGCCTTTCCCTCCTGCCTCCACCAAGCTCCGCCTCATGTGCAGTTACGGCGGCCACATCGTCCCTCGCCCTCACGACAAGTCCCTCTGCTATGTCGGCGGCGATACTCGCATCGTCGTGGTTGAACGCGCCACCTCCCTCTCTGACCTCTCCACGCGCCTCTCCAAAACCTTCCTTAATGGAAGACCCTTCACTCTCAAGTACCAGCTCCCAAACGAAGACCTCGATTCCCTCATCTCTGTTACCACCGATGAAGACCTTGAGAACATGATCGATGAGTACGATCGAACTACCTCAGCCAATTCATCCATCAAACCCTCACGTATTCGCCTCTTTCTCTTCCCTTCAAAACCCGATTCCACTCACTCCATTCCCCCTCAAATCCTCGATACCTCCGCTAAATCCGATGACTGGTTCCTCGATGCCCTAAACGGCGCCGGATTGCTCAACCGAGGGTTCTCTGATTCCGCCTCCGTTAACTGCTTATTAGGTCTCGATGATGACGTTGCAGGGAACAATATCGAGCAAGGTTCCAGGGAGGTTGTGGAAGGTGGTGCTTCTCAGCCTGGATCCTTTGGGAATTGCAAGAATTTGAAGCAGGATGTTCACTCTGTTCCCGATTCGCCTATGCTGGAGACCACTTCCTCTTTCGGTTCTACTTCGTCGTCGCCGTCGCTGGCCAATTTGCCGCCGATTCGGGTTCATGTGGAGGATGGTATGGGTGGCGGTGGTGGGGTTAGGGTTCAGCAGGATCAGAAGATGTTGGGGATTGAGGAACAGTTTGCTCAAATGGGTGTTGGTGTTGGACAGAAACAGCAGCAGGAGGAGGGCTTTGTTATGATGTCTTCGCCGCCCCCTCCTCCGGTGCCGTCAACCCTTTCCGCCACGGCGGTGGGTGTGCCGATCGGGTCCGCGGTGGTTGCCGATCAACTTCAGATTCAATCTGGAACCACAAGGGTTCCTAGTAACCCTGTGGATCCGAAACTTAATGTGTCTGATCCACACGGTCGGATCCAGGTGCAGCAACATGTACAGGACCCAGGATATTTATTGCAACAGCAATTTGAACACCAGCAACAGCCTCCCCCTCCTCAACAGCAGCAGCAGTATATACATGGCACACACTTCATTCACCATAACCCTGGAATTCCTACATATTATCCTGTATATCCTTCCCAACAACAGCCCCATCCCCAGGTTTACTATGTGCCTGCAAGACAAGCCCAAGCTTACAACTTGTCTGTGCAGCAGGGTAATATGGGTGAATCTGCCACAGCAATCCCTTCTAGCCGCCCCCAAACTCCACCAAATCCTACTACATTGGTTCAACCATCTGCAGCTTACAACCCCATGAGAAATGCTCCCCTACCTAAAACTGAAATGACAGCAGCTGCTTACAGAACTGCAACTGCAGGAACCCCTCAATTGGTTCAAGTTCCTGCAAATCAGCACCAGCAACAATATGTCACCTACTCCCAGATCCACCATCCATCTCAGTCCATAGCCCCTACTTCTGCTCCCCCTGCTAATTATGCTTATGATTATGTGGATCCTGCTCATGCTCAAATATACTACTCTCAACCTCTGGCACCCACAATGCCTTCACAGTACCAGACCATGACAGCTGCTGCTGTGGTGCTGCCGGAAGTTTCTTCTGCTCAGCATCCCTCAGATGGCATGAAGCAGCAGATAAGAACCTCACAGCCATTATAA 1854 0.528 MEAQPQPPTPSTAPPLSSVAPPLPPPHLNYPDSVDSSPRSRNTDSWDEPFPPASTKLRLMCSYGGHIVPRPHDKSLCYVGGDTRIVVVERATSLSDLSTRLSKTFLNGRPFTLKYQLPNEDLDSLISVTTDEDLENMIDEYDRTTSANSSIKPSRIRLFLFPSKPDSTHSIPPQILDTSAKSDDWFLDALNGAGLLNRGFSDSASVNCLLGLDDDVAGNNIEQGSREVVEGGASQPGSFGNCKNLKQDVHSVPDSPMLETTSSFGSTSSSPSLANLPPIRVHVEDGMGGGGGVRVQQDQKMLGIEEQFAQMGVGVGQKQQQEEGFVMMSSPPPPPVPSTLSATAVGVPIGSAVVADQLQIQSGTTRVPSNPVDPKLNVSDPHGRIQVQQHVQDPGYLLQQQFEHQQQPPPPQQQQQYIHGTHFIHHNPGIPTYYPVYPSQQQPHPQVYYVPARQAQAYNLSVQQGNMGESATAIPSSRPQTPPNPTTLVQPSAAYNPMRNAPLPKTEMTAAAYRTATAGTPQLVQVPANQHQQQYVTYSQIHHPSQSIAPTSAPPANYAYDYVDPAHAQIYYSQPLAPTMPSQYQTMTAAAVVLPEVSSAQHPSDGMKQQIRTSQPL 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi749g00012 617 MobiDBLite consensus disorder prediction 468 492 - -
Sebi749g00012 617 MobiDBLite consensus disorder prediction 254 275 - -
Sebi749g00012 617 MobiDBLite consensus disorder prediction 33 49 - -
Sebi749g00012 617 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 76 163 - -
Sebi749g00012 617 MobiDBLite consensus disorder prediction 1 51 - -
Sebi749g00012 617 MobiDBLite consensus disorder prediction 1 31 - -
Sebi749g00012 617 Gene3D - 76 161 - -
Sebi749g00012 617 ProSiteProfiles PB1 domain profile. 56 163 IPR000270 GO:0005515
Sebi749g00012 617 SMART PB1_new 71 163 IPR000270 GO:0005515
Sebi749g00012 617 CDD PB1_UP2 60 161 - -
Sebi749g00012 617 Pfam PB1 domain 72 162 IPR000270 GO:0005515
Sebi749g00012 617 MobiDBLite consensus disorder prediction 230 275 - -
Sebi749g00012 617 SUPERFAMILY CAD & PB1 domains 72 171 - -
Sebi749g00012 617 PANTHER OS05G0427100 PROTEIN-RELATED 29 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi749g00012 Sebi-Chr749 251960 254239 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi749g00012 53 264 MAP Kinase Kinase Kinase AT1G79570 32.889 6.35e-25 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi749g00012 - - jre:109013150 652.514