Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi749g00005 ATGCCGCCGTTGGATCCCGCTTCGCCGGGAATCATCATGCTCTCCGATCAGCTCACCCTCAACAAGCAATTATCCTACGAAAAAGGCGCCACCGATGACGACCAGGACTGCGTTGTGTGCAAATCCACCTTCAAGGACGGAGACCACGTTCGTATGCTTCCTTGCCGCCATGTCTACCACCGCCGATGCTTCGACGGATGGCTTCACCAGTACAAGTTCAACTGTCCCATCTGCCGCTACAATCTCATCTCTGACGAGCGCGTGGCTCTCACGGAGCGCCGTGTCGGTAGCCAACTCATCTCCTGGTTTTCCCTGCGTTGA 321 0.5639 MPPLDPASPGIIMLSDQLTLNKQLSYEKGATDDDQDCVVCKSTFKDGDHVRMLPCRHVYHRRCFDGWLHQYKFNCPICRYNLISDERVALTERRVGSQLISWFSLR 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi749g00005 106 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 12 84 IPR013083 -
Sebi749g00005 106 PANTHER - 23 90 - -
Sebi749g00005 106 SMART ring_2 37 78 IPR001841 -
Sebi749g00005 106 ProSiteProfiles Zinc finger RING-type profile. 37 79 IPR001841 -
Sebi749g00005 106 Pfam Ring finger domain 36 79 IPR001841 -
Sebi749g00005 106 SUPERFAMILY RING/U-box 24 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi749g00005 Sebi-Chr749 68935 69255 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi749g00005 3 105 C3H Transcription Factor Family AT1G15100 49.541 7.79e-33 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi749g00005 K16282 - gmx:100803789 151.754