Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi748g00003 ATGTCAATAACCTTGCTCACCAACTTGGAGCGCATTGAGACACTACTCAATGCGCCAAGCACCATTAGTGCATCCAACAAAAGATGGCACTCTGCCTTCATGACCATCTATTGTTCCCGTGCCCTGATGTCACACTTCACTCTCAACAAAAACAACATTCCAGAAAAACCTTCTCTACCTTTCACTGTCATTGATTTCAATTCACACCAATCCTTCGCTATTCATCAAGCGGGTCTCACCGAGATTGTCAAAGATAAAAACGTTCAGAGCCTTCAGAGATATGGTGGGCTTGAAGGGAACACAAAGGATGAGAATGGGGTTAAAGAGTTCAATGGGAGCAAGACTAAGTTTGATGATATCATGAATGCTGTTGTGGGAATTGTTGCTGATGCAGTTACTATTGTGGTTGTTGCAATCCCTGAGGGTCTTCCATTAGCTGTGACTCTGACCTTGGCTTATTCAATGAAGAAAATGATGGCTGATCAAGCAATGGTGAGGAAGCTCTCTGCATGTGAGACTATGGGGTCTGCTACCACTATTTGTACTGATAAAACAGGCACACTCACATTGAACCAGATGAAGGTGACCAAGTTTTGGCTTGGCCTAGAACCTGTGGTAGAGGGTGTCTACTCAATGGTTGCTCCATTTGTTCTTCAACTGATCCAGGAAGGAGTGGCTCTCAACACAACTGGTGGTGTGCACAAGTCTAATTCAGGTTCTGAATTTGAGTTTTCAGGTAGTCCCACAGAAAAAGCAATCCTATCATGGGCTGTTTTGGAATTGAACATGGATATGGAGAACTTGACAAAAAGCTGTTCTATCATTCAAGTTGAGACATTCAACTCAAAGAAGAAAAGAAGTGGGGTTTTGTTGAGAAGGAAAGCAGACAACACAGTTAATGCACACTGGAAAGGAGCAGCAGAGATGGTACTAAAGATGTGTTCAAGATACTATGATGCTTCTGGCATTGTGAAAGATCTTGACAATGATAGCAGGATGAAATTTGAAGGCATTATTCAAGGTATGGCAGCTAGTAGTCTTCGTTGTATTGCTTTGGCACATGTAGAAATTGCAGGAGAAGAGGATGGAGATGAAGAAGACAACATAGTGGTAAAAGACAATGGTCTAACTCTGTTAGGACTTGTTGGTATTAAGGATCCATGTCGTCCAGGGGTGAAGAAAGCTGTAGAAGCTTGCCAACATGCTGGTGTGAATGTCAAAATGATAACAGGTGACAATGTTTTCACTGCAAAAGCTATAGCAACTGAATGCGGCATTCTTAGGCCTAATCAGGACACTGATGGAGCAGTGGTTGAAGGAGAGGAATTTCGCAACTACACACATGAAGAGAGATTACAGAAAGTGGACAAAATCTGTGTGATGGCAAGATCCTCTCCTTTTGATAAACTTCTAATGGTTCAATGCTTGAAACAGAAAGGCCATGTAGTTGCTGTCACTGGGGATGGCACAAATGATGCACCAGCACTCAAGGAAGCTGATATAGGACTTTCTATGGGAATTCAAGGTACTGAAGTGGCTAAAGAGAGTTCAGATATTGTTATATTGGATGACAATTTTGCATCTGTAGTCACAGTCTTGAGGTGGGGAAGGTGTGTCTATAACAACATCCAGAAGTTCATTCAATTTCAGTTGACAGTGAATGTTGCTGCACTTGCAATCAACTTTGTAGCAGCAGTGTCAGCAGGGGAAGTGCCACTTACAGCAGTGCAATTATTATGGGTGAACTTGATCATGGACACATTGGGTGCTTTAGCTCTTGCAACAGAGAAACCTACCATGGACTTGATGGACAAACCACCAGTAGGTAGAACAAAACCTCTTATCACAAACATCATGTGGAGGAATCTGTTAGCTCAAGCTTTATACCAGATAGCAGTTTTGCTGACTCTTCAATTCAAAGGTGAGTCTATCTTTGGTGTGACATCAGGGGTAAATGACACATTGATTTTCAATACATTTGTTCTATGCCAAGTGTTCAATGAGTTCAATGCAAGGAAGATGGAGAAGAAGAATGTTTTCAAAGGCATTCACAGGAGCAAGCTGTTTTTGGGAATTATTGGTATGACATTAATCCTTCAGGTGGTGATGGTGGAGTTTCTCAAGAAGTTTGCTGATACAGAGAGGTTAAATTGGTGGCAATGGGCTGTTTGTATTGGTCTTGCTGCAATTTCCTGGCCAATTGGTTGGGCTGTGAAGTTGATACCTGTCCCAGATACACCATTATTCAGTTTTTTGAGTAAGATGAAGAAATGA 2274 0.4191 MSITLLTNLERIETLLNAPSTISASNKRWHSAFMTIYCSRALMSHFTLNKNNIPEKPSLPFTVIDFNSHQSFAIHQAGLTEIVKDKNVQSLQRYGGLEGNTKDENGVKEFNGSKTKFDDIMNAVVGIVADAVTIVVVAIPEGLPLAVTLTLAYSMKKMMADQAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTKFWLGLEPVVEGVYSMVAPFVLQLIQEGVALNTTGGVHKSNSGSEFEFSGSPTEKAILSWAVLELNMDMENLTKSCSIIQVETFNSKKKRSGVLLRRKADNTVNAHWKGAAEMVLKMCSRYYDASGIVKDLDNDSRMKFEGIIQGMAASSLRCIALAHVEIAGEEDGDEEDNIVVKDNGLTLLGLVGIKDPCRPGVKKAVEACQHAGVNVKMITGDNVFTAKAIATECGILRPNQDTDGAVVEGEEFRNYTHEERLQKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFASVVTVLRWGRCVYNNIQKFIQFQLTVNVAALAINFVAAVSAGEVPLTAVQLLWVNLIMDTLGALALATEKPTMDLMDKPPVGRTKPLITNIMWRNLLAQALYQIAVLLTLQFKGESIFGVTSGVNDTLIFNTFVLCQVFNEFNARKMEKKNVFKGIHRSKLFLGIIGMTLILQVVMVEFLKKFADTERLNWWQWAVCIGLAAISWPIGWAVKLIPVPDTPLFSFLSKMKK 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi748g00003 757 PRINTS P-type cation-transporting ATPase superfamily signature 181 195 - -
Sebi748g00003 757 PRINTS P-type cation-transporting ATPase superfamily signature 380 391 - -
Sebi748g00003 757 PRINTS P-type cation-transporting ATPase superfamily signature 510 522 - -
Sebi748g00003 757 PRINTS P-type cation-transporting ATPase superfamily signature 486 505 - -
Sebi748g00003 757 PRINTS P-type cation-transporting ATPase superfamily signature 402 412 - -
Sebi748g00003 757 PRINTS H+-transporting ATPase (proton pump) signature 486 502 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Sebi748g00003 757 PRINTS H+-transporting ATPase (proton pump) signature 518 543 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Sebi748g00003 757 PRINTS H+-transporting ATPase (proton pump) signature 335 353 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Sebi748g00003 757 SUPERFAMILY Calcium ATPase, transmembrane domain M 119 743 IPR023298 -
Sebi748g00003 757 NCBIfam HAD-IC family P-type ATPase 459 567 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Sebi748g00003 757 NCBIfam HAD-IC family P-type ATPase 124 202 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Sebi748g00003 757 Gene3D - 116 739 - -
Sebi748g00003 757 Gene3D - 178 531 IPR023214 -
Sebi748g00003 757 PANTHER CATION TRANSPORTING ATPASE 93 743 - -
Sebi748g00003 757 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 187 392 IPR023299 GO:0000166
Sebi748g00003 757 SUPERFAMILY HAD-like 179 591 IPR036412 -
Sebi748g00003 757 NCBIfam calcium-translocating P-type ATPase, PMCA-type 121 743 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Sebi748g00003 757 FunFam Calcium-transporting ATPase 191 387 - -
Sebi748g00003 757 SFLD Haloacid Dehalogenase 163 539 - -
Sebi748g00003 757 FunFam Calcium-transporting ATPase 503 745 - -
Sebi748g00003 757 Pfam Cation transporting ATPase, C-terminus 571 741 IPR006068 -
Sebi748g00003 757 Pfam haloacid dehalogenase-like hydrolase 178 500 - -
Sebi748g00003 757 FunFam Calcium-transporting ATPase 381 531 - -
Sebi748g00003 757 Gene3D - 191 387 IPR023299 GO:0000166
Sebi748g00003 757 SFLD p-type atpase 163 539 IPR044492 -
Sebi748g00003 757 ProSitePatterns E1-E2 ATPases phosphorylation site. 183 189 IPR018303 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi748g00003 Sebi-Chr748 60606 63653 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi748g00003 93 752 Primary Pumps ATPases AT3G63380 73.374 0.0 962
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi748g00003 K01537 - gmx:100793918 1170.99