Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi748g00001 ATGCGTGGTACGTTGGAATCCATCAAGAATTCTATTGCAACCATCCAAGATGTGCTCCCTATTGCCGAAAAAATGCAAGAACAAAACCTTGCTGTGCAACACTGGATAAGAAGGTTAAAAGATGTACTCCATGATGCAGATGACTTGTTCGATGACATTGCTACTGAAAATTTGCGACTCAAACTTGATGGTCGTGAGAAAATTGTCAAAAAGGTATGCAATTTCTTTTCACTCTCAAGTGGAATTGTTTTTCGTCGTCAAATGAATAACAAAATAAAGAAGATACTAAAAGATGTTGACTCTGTAGCCAGTCTTATGTCTAGATCATTGAACTTAGATATGGATCATTTGAATATAATCCAATCACGTGAGAGGAAAACAAGTTCTGTGGTGTTAGAATCAGTTATCATTGGAAGAGAACATGATAAGAGAGAGATTCTAAGGCTGTTGTTGGAACCGCTTGGAAACGAAAATGTTTCCTTGATTGGTATTGTTGGTATCGGTGGTATAGGCAAGACAACTGTTGCCCAAATGGTATACAATGATACTGAAGTCCAACGGCACTTTGAAATGCAAATGTGGGTGTGTGTTTCTGATAACTTTGATGTCAAGAAGGAAATATTAGAACTATTGAAGATTGGTAGTGGATGCAATGACCAAGACACAATGGAAGTCTTAAATGGCAGGAAGTATTTGTTAGTGTTGGATGATATGTGGAACGAAAATCGTGAAAGATGGGATCATTTGACAAGTTTTTTGATGCGTGGGGCTCCAGGTAGTAGGATTTTAATAACAACTCGTAGTGAAAATGTAGCCAAAGTAATGGGAGCTAGCTTTTTATTTCATTTGAAAGGCTTGAGTGAAGAATATTCTTGGAGTTTAGTATTTAAAGATTATGAATCTGTAATGTACCATAAACTAGAATCAGTTGGTAGAGAAATTGTAAGAAAGTGTGGAGGAGTTCCACTAGCAATTAAAATAGCGGCAGACGCATTACGATCTAAACATGCAGAAGTAGATTGGATTGTATATTTAGAACATATGAATGAAGACAGATCAGATACTGATATCCTACCTGTTCTAAAACTCAGTTATCAATTTTTGTCACCTGAATTGAAACAGTGCTTTGCTTATTGTTGCATATATCCCAAAGGATGGGAAATTGAAAAGAATGAATTGATTCAATTATGGATGGCGCAAGGTTATCTTGGTGAGCACCAAATGGAAGATGTGGGCGATGAATTTGTTGAGACTCTTATTAAGATGTCAATGTTTCAAGATGCAAAAATTGATGAATATGGTAACCTAGTTAGTGTGAAAATGCATGATTTGATACATGATCTTGCATTGCATGTAGCTGGCGATGATTATTACTTGGATAGTCGGAGACTGAGAGAAGTCAACGAACCCATGCACATGTGCATCTCATATGAATCTAACACCATGGATTCATTGGGTTCAATAGAAGCAGGTAGGCTGCGAACATTTTTTCTGCGGCAGTCAAATGATGAGGAGGAGAGTGGTCACACTCAGTTGATGAGAGAATTGCCTGTTGTTTTAAGATTCAAGCGCTTACGCGTCTTGAATCTGTCCCGTTCTTCTTTAAAGACGTTGTCAAATTCAATTGAAAAATTGACACATTTAAGATATCTTGACTTATCTTGGTGTGTAGAACTAACATTGAAATTGACTGGTTGTGAGGCACTCGAATTTTCTACCCAAGTTGTCACAAAGTTAATCAGTTTGAGGCACCTTGAGATTCATAGTTGCAAAGCCTTTGAGGACATGATGCCAGCTGGACTGGGGAAGTTGTCTTCATTGCAATCCTTATCAAGCTTTTACGTGGTGGATGCAGCAGATCAGAAGAAGAAGAAAGCTGGCCAACTGAATGAATTACAGAACTTAAATAATCTGAGGGGAAATTTAAAGATTAACGCACTTGGTCTGATAAGAAACGTGATGTCGGAATCAAAGGAAGTAAACTTGAAAGAGAAGAAACTCCTTGAGTCCTTGAATTTAAATTGGGGGCATGGGGACGTTAACAGGGACGGCAGCGAACAACTATTAAGAAACCTTCGTCCGCACCAAAATCTAAAAAGATTGACCATTTGGTGGTATCCGGGTTCGAGGTTCCCTAATTGGTTTTCTTCAATCATAAATCTTTCTTACATTGCTCTCTTTGGCTTTGATGATTGCAAATATCTCCCACCATTACATCAACTGCCATGCCTCAAGTCTCTTGAGATAGGTTCTATGAAAGCATTGGAGTGCATATCTTATGGGATGGGGTCGGACAAAGCTCCCTACCTGACTAAGGCAAAGGAAAAGAGAGCAGATTCGAGGGAAGAAACCCTTCATATGAAGAAGACTCTGACAAGTCAAAGTTTGAACTGGATGATGAGGACGAATAGCAGAAACACTTGTTATATTGACCAAGTTATGGTTTTATTTGAAACTACTGACCTGGACTTAAGTGCAAAACGGACTTGGTGGAGCCATACCTCTCGCTGTATGTTCATGAACTTCACAAAAAGGAAGATGAAGATGAGTAAAGTAGCTGGTGACATCGGAAGAAGTCTGGGTGGAACTGGATTACAATCATTTTTCATAG 2611 0.3857 MRGTLESIKNSIATIQDVLPIAEKMQEQNLAVQHWIRRLKDVLHDADDLFDDIATENLRLKLDGREKIVKKVCNFFSLSSGIVFRRQMNNKIKKILKDVDSVASLMSRSLNLDMDHLNIIQSRERKTSSVVLESVIIGREHDKREILRLLLEPLGNENVSLIGIVGIGGIGKTTVAQMVYNDTEVQRHFEMQMWVCVSDNFDVKKEILELLKIGSGCNDQDTMEVLNGRKYLLVLDDMWNENRERWDHLTSFLMRGAPGSRILITTRSENVAKVMGASFLFHLKGLSEEYSWSLVFKDYESVMYHKLESVGREIVRKCGGVPLAIKIAADALRSKHAEVDWIVYLEHMNEDRSDTDILPVLKLSYQFLSPELKQCFAYCCIYPKGWEIEKNELIQLWMAQGYLGEHQMEDVGDEFVETLIKMSMFQDAKIDEYGNLVSVKMHDLIHDLALHVAGDDYYLDSRRLREVNEPMHMCISYESNTMDSLGSIEAGRLRTFFLRQSNDEEESGHTQLMRELPVVLRFKRLRVLNLSRSSLKTLSNSIEKLTHLRYLDLSWCVELTLKLTGCEALEFSTQVVTKLISLRHLEIHSCKAFEDMMPAGLGKLSSLQSLSSFYVVDAADQKKKKAGQLNELQNLNNLRGNLKINALGLIRNVMSESKEVNLKEKKLLESLNLNWGHGDVNRDGSEQLLRNLRPHQNLKRLTIWWYPGSRFPNWFSSIINLSYIALFGFDDCKYLPPLHQLPCLKSLEIGSMKALECISYGMGSDKAPYLTKAKEKRADSREETLHMKKTLTSQSLNWMMRTNSRNTCYIDQVMVLFETTDLDLSAKRTWWSHTSRCMFMNFTKRKMKMSKVAGDIGRSLGGTGLQSFFI 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi748g00001 870 Gene3D Ribonuclease Inhibitor 498 795 IPR032675 -
Sebi748g00001 870 Pfam NB-ARC domain 140 353 IPR002182 GO:0043531
Sebi748g00001 870 SUPERFAMILY L domain-like 440 759 - -
Sebi748g00001 870 PANTHER DISEASE RESISTANCE PROTEIN RP 25 757 IPR044974 GO:0006952
Sebi748g00001 870 Gene3D - 1 93 - -
Sebi748g00001 870 PRINTS Disease resistance protein signature 318 332 - -
Sebi748g00001 870 PRINTS Disease resistance protein signature 543 559 - -
Sebi748g00001 870 PRINTS Disease resistance protein signature 161 176 - -
Sebi748g00001 870 PRINTS Disease resistance protein signature 225 239 - -
Sebi748g00001 870 Gene3D - 117 279 IPR027417 -
Sebi748g00001 870 FunFam Probable disease resistance protein At1g61300 120 278 - -
Sebi748g00001 870 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 119 379 IPR027417 -
Sebi748g00001 870 Coils Coil 618 638 - -
Sebi748g00001 870 Pfam Rx N-terminal domain 3 64 IPR041118 -
Sebi748g00001 870 Gene3D - 365 451 IPR036388 -
Sebi748g00001 870 Gene3D - 285 364 IPR042197 -
Sebi748g00001 870 FunFam Probable disease resistance protein At1g63360 365 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi748g00001 Sebi-Chr748 37266 41711 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi748g00001 158 465 WRKY Transcription Factor Family AT5G45050 22.188 5.35e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi748g00001 - - mtr:25495499 690.263