Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi746g00012 ATGGCTGCTAAAAGGCTTTTTGATGATTCTGATGAAGATCACCCTCATGATAAGCCAAGCGACAAAAGGATGAGACCTAATAGACCTTCTTTTGCTTCTGTAATTGGAGAAGTGGTTATGGTGAAAAACCTGCAGAACCTTTTCTCAGCCTTGGAACCTCTGCTTAAAAGAGTGGTTAGTGAAGAGGTTGAGAGAGTGATGAGACAATGCTGTCCACTCTTCATGACAAGGTCACCTTCATTGAGAATCCAAGCAGCAGAGCAACCATCAACCCTGCAACTCTCATTCAACAAAAGGCTTTCCCTCCCTATCTTCACAGGTAGCAGGATCCTTGACATTGATGGAAACCCCATCCACATAACTCTAATTGACAAAACCAATAATAATGGCCAAGGGGTTCCCACTAGTCTCCCTCATCCAATCAAGCTAGAGATTGTGGTTCTTGATGGAGACTTTCCACCAGGTGATAATAATGAATTAGATTATTGGACTAATGAGCAATTCAATAGCCACATAGTGAAGGAGAGAACAGGGAAGAGACCATTGCTTGCAGGAGAATTGAACCTAACTATGAGGGATGGGATTGCACCAATTGGGGACATAGAGTTCACTGATAACTCTAGCTGGATTAGGAGCAGGAGGTTCAGAGTTGCAGTGAGGGTGACACCAGGGAGTAATCAAGGTGTTAGGATTCAAGAAGGGATGACAGAGGCATTTGTTGTTAAGGATCATCGTGGAGAATTGTACAAGAAACACCACCCACCAATGCTTCATGATGATGTTTGGCGCCTAGAGAAGATTGGGAAAGATGGAGCATTTCACGGAAAATTGTCCTCAGAAGGGATCAAAACTGTGCAAGACTTTCTCAAATTAGCAGTTGTTGACACTGAAAGGCTAAGACAGATTTTAGGCATTGGAATGTCAGACAAAATGTGGGAAGCCACAATCAAGCATGCAATGACTTGTGAAATGGGGAGCAAGATCTATATATACCGTGGACCTCAATTTACTATTTTTCTGAATCCAATATGCAAATTAATTAGAGCTGATATTAGTGGACAGATATTTTCCAGCAGAGAGCTGATCCATCTGAAGAATAAGGGCTATATAGACAAATTAGTGAGAGAAGCATATGCAAGGTGGCATGCCTTGGAGGAAATTGATGGAGTTTTAAATGATAACATTGCTTTGTTAACCCAAGGTGATCAAACTGTGGAGCAATTTCCAAACAATCATCATCCAGCATCGGTAGTAACATATCAACAGAACAATTATTATGGTGACAAATCTACAGAGGTTGCTAGCTATCTGCCAAGCAATAATGCACAAATAGGAAGCTCTCAGTGGTCACTGAATCATGCCTATACCACAGCATCATTTGCAAATGGCTTCCCTTATGGCTTCTCAGGATCACAATCAGATGGTGACATAACGCCTTCAGGTTCAGGTTCTGTGGATGTTGATGGTGGGGCCACAAGGCAACATTAG 1488 0.4214 MAAKRLFDDSDEDHPHDKPSDKRMRPNRPSFASVIGEVVMVKNLQNLFSALEPLLKRVVSEEVERVMRQCCPLFMTRSPSLRIQAAEQPSTLQLSFNKRLSLPIFTGSRILDIDGNPIHITLIDKTNNNGQGVPTSLPHPIKLEIVVLDGDFPPGDNNELDYWTNEQFNSHIVKERTGKRPLLAGELNLTMRDGIAPIGDIEFTDNSSWIRSRRFRVAVRVTPGSNQGVRIQEGMTEAFVVKDHRGELYKKHHPPMLHDDVWRLEKIGKDGAFHGKLSSEGIKTVQDFLKLAVVDTERLRQILGIGMSDKMWEATIKHAMTCEMGSKIYIYRGPQFTIFLNPICKLIRADISGQIFSSRELIHLKNKGYIDKLVREAYARWHALEEIDGVLNDNIALLTQGDQTVEQFPNNHHPASVVTYQQNNYYGDKSTEVASYLPSNNAQIGSSQWSLNHAYTTASFANGFPYGFSGSQSDGDITPSGSGSVDVDGGATRQH 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi746g00012 495 MobiDBLite consensus disorder prediction 472 495 - -
Sebi746g00012 495 Pfam Calmodulin binding protein C-terminal domain 327 387 IPR046829 -
Sebi746g00012 495 MobiDBLite consensus disorder prediction 1 28 - -
Sebi746g00012 495 PANTHER OS02G0177800 PROTEIN 1 462 IPR012416 GO:0005516
Sebi746g00012 495 MobiDBLite consensus disorder prediction 1 25 - -
Sebi746g00012 495 Pfam Calmodulin binding protein central domain 256 322 IPR046830 -
Sebi746g00012 495 Pfam Calmodulin binding protein-like N-terminal domain 92 244 IPR046831 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi746g00012 Sebi-Chr746 156825 162468 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi746g00012 3 389 Calmodulin-binding Proteins AT5G57580 49.745 1.14e-121 369