Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi745g00036 ATGCCTGTTATAATGTTCACTGACCTTAGCACCAATGTGCTGATAGATAAAGAACTTATGGCACCTACAAGGAAACCTAGAAGTATGAACAAGCGGTTTTCAGGTTTGAATGAAATTTTGCCTGAGAAAGATGGAGTTAGCTCAAATAAAAAAAAGCAAAGGAAGAAAAAGCTGTCTGATAAATTGGGATCTCAATGGAACAAGGAGGAACTAGAGAGGTTTTATGAAGCGTACAGGAAGTACAGGAAAGACTGGAAGAAGGTGGCTGCAGTTGTACGCAACAGGTCTGTTGAAATGGTGGAGGCTCTTTACAATATGAATCGGGCATACCTATCTCTGCCAGAGGGGACAGCTTCTGTTGTTGGCCTAATTGCAATGATGACAGATCACTATAATGTGCTGGAAGAGAGTGACAGTGAAAGGGAGAGCAATGATGCATCAGGATCTGGAAAGCCTATGAAACGAAAGCGTAGAAAAATTCAGCTTAGCATAGAAAAAGATTCTGTCCAGTCTCCATTGATTGCTTCAAATGATGGTTGCCTCTCTCTTTTGAAGAGAAGACGATTCGATGGCAGCCAACCTCGAGCAGTTGGGAAAAGGACACCTCGCATCCCAGTTAACTACTCTTATAAGAAAGATGACAGGGAAAATTATTTTTCACCTAATAAAAGAAGGCTAAAGTCAGCTTTTGATGTTAATGATGATGAAGTTGCACATGTTGCAGCTCTGGCATTAACTGAGGCTGCACAAAGAAGTGGCTCTCCCCAACACCAAGAGTCTGAGACAGTTCCTGGCAAGTTTTATGACACTTATGTGGATGAAGAGTGCTTGGAAGGTAGCATAGAAAGCAGGGGAGCTGAAAACGGCGAATATGCTAGAGCTGCTAGTTCCTTGATGAATGTGGAAGGCATAGGCACTGTTAAAGTTCATCAGAAAGGGAAAAAAAATTATGGAAAGAAGGAAAGAGGGGAAGCTGTTGGAAATCATCTTCTTGATGAGGGTGGAGAAGCATGTAGCGGCACTGAAGAAGGACTTAATTTTAGTTTGAAGGAAAAGGTTGATATTGAGGTTACTAATGCCAAACCAGAGCAATTCTCACTAAAAGGTCAGAGGAAAAGAAGCAAAAAACTTTTCTCTGGAGATGAAAGCTCTGCCTTGGATGCTTTGCAAACTTTGGCTGATTTGTCTCTAATGATACCGGCGTCTACAATGGAATCTGAATCATCAGTCCAATTGAAAGAAGAAAAAATGACTGTTGATAAAGATGAAAAGTCTGCTTTACCTGAAGGCACATCAACAAGCCAAAACAGAGATAAAATTAAACTCCCAGGTTTGAAACAAAAGATTGTTCATGCAGTCCATGGAGTTGAGATTTCAACCTCCAAAAAATCAAAACTTGGTGGGGAATCAGTAGATGATGCTAACGCTCTCTTTGAATCAAAAGAGCAGTTTACCTCTGCTGATAGAACATGGAAAAGAAAGCGCAAATCCATGGTTTCAAAGGTTGTAGATGAAGAGAATAAGCCAGTGATTATAGGAAAACACACTGATCAGATTTTCACTCTGGCAAAACAATTGAAGTCAGTCAGATCATCAGAAAGTTCCCTGTGTAGTGACCAGAAAGATTTGAGAGTATCAACTGCAGAAATTCTACCTGTGAAAGAAGTTAGTTCATCTACTAAACAAAGAAATAGACATAAGATGAGTTCACAGAAATCGTTCATGCCTAAAGAGAAATCTTCTGAGAACATATTGAAAAGTCACCCTAATAAGTATTTGACCCCTGTCCAAGATAGGGCATTATTTATAAAGGAAAAGCTTTCAGGTTGCTTGTCATCTTATATGCTTCGCAGATGGTGTATGTTTGAATGGTTTTATAGCGCAATCGATTATCCGTGGTTTTCCAAAAGGGAGTTCATGGAGTACTTAAATCATGTTGGTCTAGGGAATATCCCGAGGTTAACACGTGTTGAGTGGAGTGTCATAAAAAGTTCCCTTGGCAAACCTCGCAGGTTTTCTGAACACTTTCTCCATGAAGAAAGAGAAAAACTTGAACAGTATCGGGAATCTGTTAGGAAACATTACACTGAACTGCGGACTGGTATGAAAGATGGACTTCCAACAGATTTAGCTAAACCTTTATATGTTGGACAACGAGTGATTGCTCTTCACTCAAAAACAAGAGAGATTCATGATGGAAGTGTGCTTACAGTTGACCATGAGAAATGCAGGGTTCAGTTTGACCGTCCTGAATTGGGTGTTGAATTTGTCAAGGACATTGATTGCATGCCTTTGAATCCACTGGATAATTTGCCAGAAGCTCTGAGGAGGCAGATTGGTGCTGCTAAAGTACCTTGTATGAGTAAAGAACCACATATGAAAGGAAATTCAAGTTTTGGGGGGTGCGTGACATGTGCTTCAAATGGACCTGTGGGGAAGGCACCCACCTTGTCAAGTACTTTGGCTAAACAGGAAAAGGCTGATGTTAACCCTTCAGTTGCCCAAACAAAGGCTGGTGTTATTGATCACTTCTATACACAACAAGCAGTGTATACTCAACCTTGTATAGGGACAAATGATCAAGCTAAGGAAGCTGACATACATGCCCTTTCTGAGCTGACGCATGCTCTAGATAAAAAGGAGAGATTGTTGATGGAACTTAAAAATGCAAATGACATGATGGAAAATCAGAATGACACAGACTGCTTCAAAGATTCAGATGCTTTCAGGAAGCATTACGCCACGGTTTCCAATGCCCTGCTTCATTTGAGGCAACGTAATACTTACCCAGGAAACTCTCTGCCACCATGGATGAAGCCCCAAGCAAGTTTCAATGTTCATGATGGCCTTCCCAGTACGTTGGATAGTTCTCTAACTCAAGAGTTAGGGTCAACTGTCATTGAAATTATCAAAGGATCCAGGCTTAAAGCACATGCCATGGTGGATGCTGCATTTCAGGCATTGTCTTCAACGAAGGAAGGAGAAGATGCTTTCATGAGGATTGGGCAGGTATTGGATTGTATTGATTATCAGCAGTTGGTCACCAACTCTAGGTTACCTGTGATCAAGTCCCAAGAGCAAGCGAATGGCAGTTTTGATTACCATAATAAGTCAATTTGCTGTTCATCTGAGCCTATACTCAATGATGCTTCTGGTCCAAAATTGCATCATGATTCTGACAAAGTTGATACTCAAATTCCTTTGGATCTCATCACGTCCTGTGTTGCTACATTGATCATGATACAGACTTGTACCGAACGACAATATCCTCCAGCTGATGTGGCCCAGATATTAGATTCTGCTGTTACGAGCCTACACCCATGCAGTCCACAAAACCTTCCTATTTATAGAGAAATTCAAATGTGCATGGGTAGAATTAAGACCCAGATGTTAGCTCTCATTCCTACTTGA 3411 0.4093 MPVIMFTDLSTNVLIDKELMAPTRKPRSMNKRFSGLNEILPEKDGVSSNKKKQRKKKLSDKLGSQWNKEELERFYEAYRKYRKDWKKVAAVVRNRSVEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVLEESDSERESNDASGSGKPMKRKRRKIQLSIEKDSVQSPLIASNDGCLSLLKRRRFDGSQPRAVGKRTPRIPVNYSYKKDDRENYFSPNKRRLKSAFDVNDDEVAHVAALALTEAAQRSGSPQHQESETVPGKFYDTYVDEECLEGSIESRGAENGEYARAASSLMNVEGIGTVKVHQKGKKNYGKKERGEAVGNHLLDEGGEACSGTEEGLNFSLKEKVDIEVTNAKPEQFSLKGQRKRSKKLFSGDESSALDALQTLADLSLMIPASTMESESSVQLKEEKMTVDKDEKSALPEGTSTSQNRDKIKLPGLKQKIVHAVHGVEISTSKKSKLGGESVDDANALFESKEQFTSADRTWKRKRKSMVSKVVDEENKPVIIGKHTDQIFTLAKQLKSVRSSESSLCSDQKDLRVSTAEILPVKEVSSSTKQRNRHKMSSQKSFMPKEKSSENILKSHPNKYLTPVQDRALFIKEKLSGCLSSYMLRRWCMFEWFYSAIDYPWFSKREFMEYLNHVGLGNIPRLTRVEWSVIKSSLGKPRRFSEHFLHEEREKLEQYRESVRKHYTELRTGMKDGLPTDLAKPLYVGQRVIALHSKTREIHDGSVLTVDHEKCRVQFDRPELGVEFVKDIDCMPLNPLDNLPEALRRQIGAAKVPCMSKEPHMKGNSSFGGCVTCASNGPVGKAPTLSSTLAKQEKADVNPSVAQTKAGVIDHFYTQQAVYTQPCIGTNDQAKEADIHALSELTHALDKKERLLMELKNANDMMENQNDTDCFKDSDAFRKHYATVSNALLHLRQRNTYPGNSLPPWMKPQASFNVHDGLPSTLDSSLTQELGSTVIEIIKGSRLKAHAMVDAAFQALSSTKEGEDAFMRIGQVLDCIDYQQLVTNSRLPVIKSQEQANGSFDYHNKSICCSSEPILNDASGPKLHHDSDKVDTQIPLDLITSCVATLIMIQTCTERQYPPADVAQILDSAVTSLHPCSPQNLPIYREIQMCMGRIKTQMLALIPT 1136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi745g00036 1136 MobiDBLite consensus disorder prediction 41 62 - -
Sebi745g00036 1136 MobiDBLite consensus disorder prediction 405 437 - -
Sebi745g00036 1136 PANTHER LIN-9 20 1136 IPR010561 GO:0006351|GO:0017053
Sebi745g00036 1136 SMART DIRP_2 625 726 IPR033471 -
Sebi745g00036 1136 Pfam Myb-like DNA-binding domain 64 101 IPR001005 -
Sebi745g00036 1136 CDD SANT 66 100 IPR001005 -
Sebi745g00036 1136 Gene3D - 9 118 - -
Sebi745g00036 1136 SUPERFAMILY Homeodomain-like 60 109 IPR009057 -
Sebi745g00036 1136 Coils Coil 677 697 - -
Sebi745g00036 1136 FunFam Protein ALWAYS EARLY 3 isoform A 22 118 - -
Sebi745g00036 1136 ProSiteProfiles SANT domain profile. 61 98 IPR017884 -
Sebi745g00036 1136 MobiDBLite consensus disorder prediction 135 158 - -
Sebi745g00036 1136 Pfam DIRP 624 724 IPR033471 -
Sebi745g00036 1136 MobiDBLite consensus disorder prediction 409 427 - -
Sebi745g00036 1136 SMART sant 62 110 IPR001005 -
Sebi745g00036 1136 Coils Coil 870 900 - -
Sebi745g00036 1136 MobiDBLite consensus disorder prediction 135 151 - -
Sebi745g00036 1136 MobiDBLite consensus disorder prediction 556 579 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi745g00036 Sebi-Chr745 368362 378785 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sebi745g00036 DIRP 5e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi745g00036 - - qsa:O6P43_011108 1473.37