Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi745g00013 ATGGGGATCGATCTTAAGGCTGGGGGTAAGAGCAAAAAGACCAAACGAACAGCACCCAAGTCAAATGATATCTACCCTCAATCTCCTTGTCAAGCTCATTATGAGACCTTCACCATTCCAAGGACTGGAAGCAATTTCAATGCTGTCATACTTAAGAGATTGTTCATGAGCAAGGTTAACAGGCCTCCAATTTCTTTGTCAAGGTTAATTAAGTTCATGAAGGGCAAGGAAGGTAAAATTGCTGTTGTAGTGGGGACTGTAACTGATGATATCAGAGTATATGAAGTTCTAGCCCTAAAAGTTACTGCACTTAGGTTCACAGAAACAGCACGAGCAAGAATAGAAAAGGCCGGTGGGGAATGCTTGACATTTGATCAGCTTGCTCTGAGGGCTCCTTTGGGACAGAACACGGTCCTTCTTAGAGGCCCAAAGAATGCACGGGAAGCTGTGAAACACTTTGGTCCTGCTCCTGGTGTGCCACACAGCAATACCAAGCCTTATGTACGATCTAAGGGGAGGAAATTTGAGAGGGCTAGAGGAAGGAGGAACAGCAAAGGATTTAGGGTTTGA 570 0.4491 MGIDLKAGGKSKKTKRTAPKSNDIYPQSPCQAHYETFTIPRTGSNFNAVILKRLFMSKVNRPPISLSRLIKFMKGKEGKIAVVVGTVTDDIRVYEVLALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSNTKPYVRSKGRKFERARGRRNSKGFRV 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi745g00013 189 ProSitePatterns Ribosomal protein L18e signature. 52 69 IPR021132 GO:0003735|GO:0005840|GO:0006412
Sebi745g00013 189 Gene3D - 1 189 - -
Sebi745g00013 189 MobiDBLite consensus disorder prediction 1 27 - -
Sebi745g00013 189 MobiDBLite consensus disorder prediction 152 189 - -
Sebi745g00013 189 SUPERFAMILY Ribosomal proteins L15p and L18e 30 141 IPR036227 -
Sebi745g00013 189 MobiDBLite consensus disorder prediction 172 189 - -
Sebi745g00013 189 PANTHER 60S RIBOSOMAL PROTEIN L18 1 189 IPR000039 GO:0003735|GO:0005840|GO:0006412
Sebi745g00013 189 FunFam 60S ribosomal protein L18 1 189 - -
Sebi745g00013 189 Pfam Ribosomal protein 60S L18 and 50S L18e 2 189 IPR021131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi745g00013 Sebi-Chr745 83419 85258 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi745g00013 3 189 Cytoplasmic Ribosomal Protein Gene Family AT2G47570 71.809 1.98e-93 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi745g00013 K02883 - gmx:100791657 319.701