Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi745g00010 ATGGGGATCGATCTTAAGGCTGGGGGTAAGAGCAAAAAGACCAAACGAACAGCACCCAAGTCCAATGATATCTACCTCAATCTCCTCGTCAAGCTTTATCGCTTCCTTGTTCGAAGGACAGGAAGCAATTTCAATGCTGTCATACTTAAGAGATTGTTCATGAGCAAGGCTAACAGGCCTCCAATTTCTCTGTCAAGGTTAATTAAGTTCATGAAGGGCAAGGAAGGTAAAATTGCTGTTGTAGTGGGGACTGTAACTGATGATATCAGAGTATACGAAGTTCCAGCCCTAAAAGTTACTGCACTTAGGTTCACAGAAACAGCACGAGCAAGAATAGAAAAAGCCGGTGGGGAATGCTTGACATTTGATCAGCTTGCTCTGAGGGCTCCTTTGGGACAGAACACGGTCCTTCTTAGAGGCCCAAAGAATGCACGGGAAGCTGTGAAACACTTTGGTCCTGCTCCTGGTGTGCCACACAGCAATACCAAGCCTTATGTACGATCTAAGGGGAGGAAATTTGAGAGGGCTAGAGGAAGGAGGAACAGCAAAGGATTTAGGGTTTGA 564 0.4574 MGIDLKAGGKSKKTKRTAPKSNDIYLNLLVKLYRFLVRRTGSNFNAVILKRLFMSKANRPPISLSRLIKFMKGKEGKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSNTKPYVRSKGRKFERARGRRNSKGFRV 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi745g00010 187 Pfam Ribosomal protein 60S L18 and 50S L18e 2 187 IPR021131 -
Sebi745g00010 187 SUPERFAMILY Ribosomal proteins L15p and L18e 20 139 IPR036227 -
Sebi745g00010 187 MobiDBLite consensus disorder prediction 150 187 - -
Sebi745g00010 187 PANTHER 60S RIBOSOMAL PROTEIN L18 1 187 IPR000039 GO:0003735|GO:0005840|GO:0006412
Sebi745g00010 187 MobiDBLite consensus disorder prediction 170 187 - -
Sebi745g00010 187 Gene3D - 1 187 - -
Sebi745g00010 187 FunFam 60S ribosomal protein L18 1 187 - -
Sebi745g00010 187 ProSitePatterns Ribosomal protein L18e signature. 50 67 IPR021132 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi745g00010 Sebi-Chr745 75398 77220 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi745g00010 3 187 Cytoplasmic Ribosomal Protein Gene Family AT2G47570 76.882 7.63e-103 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi745g00010 K02883 - pop:7491291 349.362