Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi745g00005 ATGGCATTACTTAATTTCCTTTTCATTCTCCTGCTTTTACCCTCCTCATTTGAGGCTTTCTCAGATGAAATTCCCTCTGATATCCAAACCCAAGACATGCATGCCTTGATTGCACAAGCCTGCATGGACATTGAGAACCAAAACACATGCCTCACAAACATTCAAAATGAGCTCACCAAAATTGGCCCACCAAGCCCCACTTCTGTCATAAGTGCTGCACTCAGGACCACACTCAATGAAGCCCAAAGTGCTATTAACAACATAACAAGATTCAGCACATTCTCTGTCAGTAACAGGGAACAAATAGCCATAGAAGATTGCAAGGAGCTTCTTGATTTCTCTGTGTCTGAGCTGGCATGGTCATTAGGGGAAATGAGGAGAATCAGAGCAGGGGACAAAAACGTGCAATATGAAGGAAACCTTGAAGCTTGGCTAAGTGCAGCTCTTAGCAACCAAGACACGTGTCTTGAAGGATTTGAAGGCACTGACAGACGCCTTGAGAGCTACATTAGTGGAAGCTTAACACAAGTCACACAGCTTATAAGCAATGTTCTGTCTCTATACTCTCAATTGCATAGCTTACCCTTCAGGCCTCCAAGGAACACCACCACCACCACTCTTTTAACAAATAATGAAGAACAACAAAGCTTGGACATAGAGTTTCCTGAATGGATGACAGAGGGTGATCAAGAGCTCCTTAAATCCAGGCCACGTGGCATTCGTGCAGATGCTGTTGTGGCATTGGATGGAAGTGGTCACTACAGAACAATCACAGATGCTGTTAATGCAGCTCCAAGTCATAGCAACAGGAGATATATTATATACGTGAAGAAAGGACTTTATAAGGAAAATGTTGATATGAAGAAGAAAATGACCAACATCATGCTCGTAGGTGATGGTATTGGCCAAACCATTATCACAAGCAACCGCAATTTCATGCAAGGATGGACCACTTTTCGAACTGCCACACTTGCTGTATCTGGGAAGGGTTTCATTGCAAGGGACATGACATTTAGGAACACTGCTGGACCAGTGAATCATCAAGCTGTGGCACTGCGTGTGGATTCAGATCAATCTGCTTTCTATAGGTGCAGTGTGGAAGGGCACCAAGATACTCTTTACGCACACTCACTGAGACAATTTTACCGTGAGTGTGAAATTTATGGCACCATAGACTTTATTTTTGGCAATGGGGCTGCTGTGTTGCAAAATTGCAAGATATACACTAGAGTCCCACTTCCTTTGCAGAAGGTTACCATCACGGCCCAAGGAAGAAAAAGCCCACATCAGAGCACTGGGTTTACAATCCAGGATAGTTATGTTTTGGCTACCCAGCCCACATATTTGGGGAGGCCATGGAAGCAATACTCTAGAACAGTATACATTAACACATACATGAGTGCGATGGTTCAACCACGAGGGTGGCTTGAGTGGCTTGGAAACTTTGCTTTGGACACATTGTGGTATGGTGAGTACAGAAATTATGGGCCTGGTTCATCTCTCGCGGGTAGAGTCAAATGGCCCGGTTATCATATCATGAAAGATGCTGGTACCGCTAGTTTCTTCACGGTTCAACGGTTCATTAATGGTGACTCATGGTTGCCGGGAACAGGCGTCAACAATCACACCGACGCCACTCTCCGGAGGGCTTGGAAAGACGACGGAAGATTCATTCCACCGCCTGAGCAAGTCCTTCTCATCATTTCATTAACCAGCAGCTCCTTCCTTTACCAAGTACGAAGGTGTGGATTAGGAGCTGCTAATAATTTCAAAATGTCTGGGGGAGATTCACGAAAGAGTAGGAGACTGGCCCTAATAGGGGTTTCAACGTTCTTACTGGTGGCTATGGTGGTTGCTGTTACCGTTAGTGTTGGGTACAGCAAAAATGGTTCCGGCGAAGATTCAAAGGATAAAAACAAATCCCACGTGGCTTCATCCATGAAAGCCGTGAAAACCATTTGTGCACCCACAGATTACAAAAAGGAATGCGAGGAAAGTCTCACGGCACAGGCTGGTAACACAACCGACCCAAGGGAACTCATCAAAATCGCCTTCAACGTAACCATCACAAGAATCAGTGAGGGACTCGAGAAAACCCAGCTAATGCACGAGGTTGAGAACGATCCTCGAACCAAAGAGGCACTCGACACGTGTAAGCAACTCATGCACCTCTCCATTGAGGAATTCAAACGGTCACTCGAGAGATTCGGTAAATTCGATCTCAACAACCTCGACAATATCCTAACGAGTTTAAAGGTATGGCTCAGCGGTGCAATCACGTACCAAGAAACGTGCCTTGACGCGTTTGAGAACACAACAACCGAAGCTGGTCACAAGATGAAGGACGTTTTGCAAACTGCCATGCACATGAGCAGTAACGGTCTTGCTATCATCACCGAGCTGTCAAAAACTCTCGATGAGATGCATCTCACAAGGCCTGGGAGACGCCTCTTGAAGGAAGCTGAGGAGTTGGAAGTGCTTGGTCACGATGACTTTGAGCTTGAACTTCCTGAATGGGTTGATGATCGCGTCGGTGTTCGTAGGCTCCTACGCATGACCGCAAGGAAACTCAGTGCTCACGTGACCGTTGCCAAGGATGGAAGTGGAAATTTCACAACCATCAACGAGGCATTGAAACACGTGCCAAAGAATAACCTAAAGCCATTCGTTATCTACCTCAAGGAAGGCGTTTACGATGAGTACGTTGAAATCTCCAGAAACATGACTCACGTGGTTTTCGTTGGTGATGGTGGTAAAAAGTCACGCATCACTGGCAACAAAAACTTCATAGATGGCGTCGGTACCTACAGAACCGCCACCGTTGCTGTTCTTGGAGATTACTTCGTTGGAATAGGCATTGGATTTGAGAATTCCGCTGGTGCAGAAAAACATCAAGCAGTCGCTTTGAGGGTGCAAGCTGACAAGTCCATTTTCTACAAATGCAGAATGGATGGCTTCCAAGACACGCTTTATGCACACACCATGCGACAGTTCTACAGGGATTGCGTTATCTCAGGAACTATTGATTTTGTCTTTGGTGATGCCGTTGCTGTTCTCCAAAACTGCACTTTCGTGGTCCGAAAGCCATTGTCAAACCAGCAATGTATTGTGACCGCACAAGGAAGGAAGGAGAGGAACCAGCCATCAGGATTAGTGATCCAAGGAGGATCCATTGTTTCAGATCCCAAATACTATCCAGTTAGGTTTGACAACAAAGCCTACTTGGCCCGTCCATGGAAGAATTTCTCGAGAACTATCTTCATGGATACTTACATTGGTGATTTGATCACACCTGATGGTTACATGCCATGGCAGACATTGGAAGGGCTTACAGGAATGGACACGTGCTTCTATGCGGAGGTGAATAACCGTGGACCTGGTTCAGATAAGTCGAAGCGCGTGAAATGGCAAGGGGTGAAGACCCTGACATCACAGGGAGCGAAGAATTTCTTGGCATCAACGTTCTTCCACGGAGATGACTGGATTAAGGTTACTAGAATTCCTTATTACCCTGGCGTGGTCTCCCCCACTCATCATTGA 3540 0.4596 MALLNFLFILLLLPSSFEAFSDEIPSDIQTQDMHALIAQACMDIENQNTCLTNIQNELTKIGPPSPTSVISAALRTTLNEAQSAINNITRFSTFSVSNREQIAIEDCKELLDFSVSELAWSLGEMRRIRAGDKNVQYEGNLEAWLSAALSNQDTCLEGFEGTDRRLESYISGSLTQVTQLISNVLSLYSQLHSLPFRPPRNTTTTTLLTNNEEQQSLDIEFPEWMTEGDQELLKSRPRGIRADAVVALDGSGHYRTITDAVNAAPSHSNRRYIIYVKKGLYKENVDMKKKMTNIMLVGDGIGQTIITSNRNFMQGWTTFRTATLAVSGKGFIARDMTFRNTAGPVNHQAVALRVDSDQSAFYRCSVEGHQDTLYAHSLRQFYRECEIYGTIDFIFGNGAAVLQNCKIYTRVPLPLQKVTITAQGRKSPHQSTGFTIQDSYVLATQPTYLGRPWKQYSRTVYINTYMSAMVQPRGWLEWLGNFALDTLWYGEYRNYGPGSSLAGRVKWPGYHIMKDAGTASFFTVQRFINGDSWLPGTGVNNHTDATLRRAWKDDGRFIPPPEQVLLIISLTSSSFLYQVRRCGLGAANNFKMSGGDSRKSRRLALIGVSTFLLVAMVVAVTVSVGYSKNGSGEDSKDKNKSHVASSMKAVKTICAPTDYKKECEESLTAQAGNTTDPRELIKIAFNVTITRISEGLEKTQLMHEVENDPRTKEALDTCKQLMHLSIEEFKRSLERFGKFDLNNLDNILTSLKVWLSGAITYQETCLDAFENTTTEAGHKMKDVLQTAMHMSSNGLAIITELSKTLDEMHLTRPGRRLLKEAEELEVLGHDDFELELPEWVDDRVGVRRLLRMTARKLSAHVTVAKDGSGNFTTINEALKHVPKNNLKPFVIYLKEGVYDEYVEISRNMTHVVFVGDGGKKSRITGNKNFIDGVGTYRTATVAVLGDYFVGIGIGFENSAGAEKHQAVALRVQADKSIFYKCRMDGFQDTLYAHTMRQFYRDCVISGTIDFVFGDAVAVLQNCTFVVRKPLSNQQCIVTAQGRKERNQPSGLVIQGGSIVSDPKYYPVRFDNKAYLARPWKNFSRTIFMDTYIGDLITPDGYMPWQTLEGLTGMDTCFYAEVNNRGPGSDKSKRVKWQGVKTLTSQGAKNFLASTFFHGDDWIKVTRIPYYPGVVSPTHH 1179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi745g00005 1179 Gene3D - 238 545 IPR012334 -
Sebi745g00005 1179 Gene3D - 854 1173 IPR012334 -
Sebi745g00005 1179 Pfam Plant invertase/pectin methylesterase inhibitor 649 797 IPR006501 GO:0004857
Sebi745g00005 1179 Pfam Plant invertase/pectin methylesterase inhibitor 36 187 IPR006501 GO:0004857
Sebi745g00005 1179 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 648 802 IPR035513 -
Sebi745g00005 1179 CDD PMEI-like_3 652 803 - -
Sebi745g00005 1179 NCBIfam pectinesterase inhibitor domain 4 192 IPR006501 GO:0004857
Sebi745g00005 1179 NCBIfam pectinesterase inhibitor domain 644 801 IPR006501 GO:0004857
Sebi745g00005 1179 FunFam Pectinesterase 646 802 - -
Sebi745g00005 1179 CDD PMEI-like_4 49 191 - -
Sebi745g00005 1179 ProSiteProfiles BRCT domain profile. 743 857 IPR001357 -
Sebi745g00005 1179 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 36 192 IPR035513 -
Sebi745g00005 1179 Gene3D Invertase/pectin methylesterase inhibitor family protein 33 192 IPR035513 -
Sebi745g00005 1179 SMART PMEI_2 645 797 IPR006501 GO:0004857
Sebi745g00005 1179 SMART PMEI_2 32 187 IPR006501 GO:0004857
Sebi745g00005 1179 ProSitePatterns Pectinesterase signature 2. 1004 1013 IPR033131 -
Sebi745g00005 1179 PANTHER PECTINESTERASE 36 537 - -
Sebi745g00005 1179 FunFam Pectinesterase 237 545 - -
Sebi745g00005 1179 FunFam Pectinesterase 34 193 - -
Sebi745g00005 1179 Pfam Pectinesterase 243 531 IPR000070 GO:0030599|GO:0042545
Sebi745g00005 1179 Pfam Pectinesterase 860 1159 IPR000070 GO:0030599|GO:0042545
Sebi745g00005 1179 SUPERFAMILY Pectin lyase-like 858 1172 IPR011050 -
Sebi745g00005 1179 Gene3D Invertase/pectin methylesterase inhibitor family protein 644 803 IPR035513 -
Sebi745g00005 1179 FunFam Pectinesterase 854 1173 - -
Sebi745g00005 1179 ProSitePatterns Pectinesterase signature 2. 387 396 IPR033131 -
Sebi745g00005 1179 SUPERFAMILY Pectin lyase-like 241 540 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi745g00005 Sebi-Chr745 38905 43771 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi745g00005 1 539 Carbohydrate Esterase AT3G05620 61.818 0.0 698
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi745g00005 K01051 - gmx:100801686 965.681