Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi744g00037 ATGAGTGATGTAAAAGAGAACGAGGAAGCTGGCCAGGCCGTGCCCTCGGCTATAGAAGAAAACCAGCAGTTGGTTGATGAACAGGTTGAAGTTCAACCTGAAGTTGCCTCTGCTCCTGTTACAGTAGAGGAAACATCAAATAATGTTGAAAATGGGTCAAATCATGTTGAAAATGGATCAAATGTTGTTGAACATGAGAAGTCTGAGCCTCCTACTGAGGATAAAAATGTCAAACTTGAGGCTGTTTCTGAAGACATGCCACAAGCAGATGTTCAGGATAGTCTTCACTCAGTCCCAGTAGAGGCTGATGCTCTGGTTTCAAATACAACTGAGTGTAAAGCTTCTCCTGATGCGAAGATGGAAGCTGAAGAATGTCCTCAAAGTAGCAAGGGTGTTGAAAATGGTGATAATGTTCATCAACATATTGTTGCTGATGCTGAAAAAGTGGTGGAGGTGAAGCCTGAAGTTTGTGAAGTGGCTGATGGTATAACTCGTGAGAATGGTGATCCCATGCCCTCAAGTGATAATGATCCTAGTCCTACTCTGCCGCAACCTGCCCCTGCTGATACAGAACTTGAAATCAAGAACGTAATAGAAGTTGAGAATAAGGCTGATGAAAAGCAAGCTACTGAACCTGCAGACAATGGGAATTCAAACTCAAAGCACTTGTTTTTCTTGGATGCTGATCATTCTTATGATGGTAATGAGTCAGGAACAGAGGAGGACCAATCAGCTTTTATGAAGGAGCTTGAAAACTTCTTTAGGGAGAGGAGCATGGAATTCAAACCTCCCAAGTTTTATGGAGAAGGACTTAATTGCCTTAAGTTATGGAGAGCTGTAACAAGATTGGGTGGCTATGATAAGGTAACGTCATGTAAGTTATGGCGGCAAGTGGGAGAGTCTTTCAAACCTCCAAAGACATGCACGACAGTTTCATGGACTTTTCGTGGATTTTATGAGAAGGCCCTTCTTGATTATGAAAGACATAAAATAAAAGGTGGTGAGCTAAATGTGCCTATTGTTTCTCAACCAGAGCCGATGAATATTGAAAATCAGGCTTCAGCATCAGGTAGAGCCCGGAGAGATGCTGCAGCACGGGCTATGCAGGGTTGGCACTCACAACGTCTCCTTGGCAATGGTGAAGTTAGTGACCCTATTATTAAGGATAGGAATCCCGTGTCTGTGCAAAAGCGTGAAAAGCAGCTTAAAAGCATCAATTTACTTAAACGTAAGAAACCGTCTTATATGGATAATGCAGTCAAAGCAGCACGCAGTAAACCATCTAAACCACAATTGGATACAGCTGTCATTGATGTTGGACCTCCTGCTGATTGGGTAAAAGTAAATGTACAAAAAACTAAAGATTGTTTTGAAGTATATGCTTTAGTTCCTGGTCTTCTGCGGGAAGAGGTCCGTGTTCAATCAGACCCAGCAGGACGCCTAGTCATAAGTGGTGAGCCTGAGCATCCTAATAATCCCTGGGGTGTGACACCTTTCAAAAAGGTTGTGAGCTTACCTTCAAGAATTGATCCACATCAGACATCCGCTGTGGATATAGCTGAGTTGACCCGGGAACCATTTAGAGGAATTATTATTTCTGCCCCTAAAACTCGCGCCAATTTCTAG 1626 0.4293 MSDVKENEEAGQAVPSAIEENQQLVDEQVEVQPEVASAPVTVEETSNNVENGSNHVENGSNVVEHEKSEPPTEDKNVKLEAVSEDMPQADVQDSLHSVPVEADALVSNTTECKASPDAKMEAEECPQSSKGVENGDNVHQHIVADAEKVVEVKPEVCEVADGITRENGDPMPSSDNDPSPTLPQPAPADTELEIKNVIEVENKADEKQATEPADNGNSNSKHLFFLDADHSYDGNESGTEEDQSAFMKELENFFRERSMEFKPPKFYGEGLNCLKLWRAVTRLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKIKGGELNVPIVSQPEPMNIENQASASGRARRDAAARAMQGWHSQRLLGNGEVSDPIIKDRNPVSVQKREKQLKSINLLKRKKPSYMDNAVKAARSKPSKPQLDTAVIDVGPPADWVKVNVQKTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPNNPWGVTPFKKVVSLPSRIDPHQTSAVDIAELTREPFRGIIISAPKTRANF 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi744g00037 541 CDD ACD_sHsps-like 449 516 - -
Sebi744g00037 541 MobiDBLite consensus disorder prediction 1 22 - -
Sebi744g00037 541 CDD ARID 242 327 - -
Sebi744g00037 541 SMART bright_3 241 332 IPR001606 GO:0003677
Sebi744g00037 541 MobiDBLite consensus disorder prediction 39 59 - -
Sebi744g00037 541 FunFam AT-rich interactive domain-containing protein 3 240 339 - -
Sebi744g00037 541 MobiDBLite consensus disorder prediction 60 75 - -
Sebi744g00037 541 Pfam ARID/BRIGHT DNA binding domain 243 327 IPR001606 GO:0003677
Sebi744g00037 541 MobiDBLite consensus disorder prediction 159 187 - -
Sebi744g00037 541 MobiDBLite consensus disorder prediction 111 137 - -
Sebi744g00037 541 ProSiteProfiles ARID domain profile. 240 331 IPR001606 GO:0003677
Sebi744g00037 541 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN ARID DOMAIN- CONTAINING PROTEIN DEAD RINGER PROTEIN B-CELL REGULATOR OF IGH TRANSCRIPTION BRIGHT 70 517 IPR045147 GO:0006357
Sebi744g00037 541 SMART ARID_2 237 327 - -
Sebi744g00037 541 MobiDBLite consensus disorder prediction 35 75 - -
Sebi744g00037 541 SUPERFAMILY ARID-like 235 340 IPR036431 GO:0003677
Sebi744g00037 541 Gene3D - 240 337 IPR036431 GO:0003677
Sebi744g00037 541 SUPERFAMILY HSP20-like chaperones 443 516 IPR008978 -
Sebi744g00037 541 Gene3D - 416 517 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi744g00037 Sebi-Chr744 363143 369257 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi744g00037 224 517 ARID Transcription Factor Family AT1G76510 62.542 7.17e-121 361
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Sebi744g00037 ARID 1.8e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi744g00037 - - gmx:100791081 805.438