Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi744g00029 ATGGCCATTGATATGCCACTATCTGGGGCTCAAAGTGTGAGGACAAACAGATCTTCCTTTGGCTCTAGCAATGGCAATGGGGATACCCCTCTACATAACTATGCTACTGTTAGCAATGGTGATGACTATGACAGCGATGGTGGCAATTTCGCACCACCCACACCAACAACTCTATCAATGGCTATTCCAGCAGATCTTGCTGGAGCTGTACCTTTGATTAATAGATTCCAGGTGGAAGGATTTTTAAAATTGATGCAAAAACAAATTCATTCTGCTGGGAAACGAGGATTTTTTTCTAAAAGATCTGTGGGCCCCCAAGTTCGAGAGAAACTTACATTTGAAGATATGCTTTCTTTCCAAAAGGATCCAATACCAACATCATTGCTTAAGCTGAATAGTGATTTAGCAAGCCGAGCGACAAAATTATTCCAGATAATTTTGAAATATATTGGAGTTGATTCATCTGATAATGTAACTCAAATGAGCTTGGAGGAACGAGTTGAGCTTGTAGGTAAACTATACAAGCAAAGTTTGAAACGTTCAGAACTCCGAGATGAACTTTTTGTCCAGATATCAAAACAAACAAGAAACAACCCTGAGAGGGAATGCTTGATTAAAGCATGGGAGCTAATGTATTTATGTGCATTGTGCATGCCTCCTAGTAAAGACATTGGAGGATACCTGTCAGAATATATTCATAACGTGGCACATGGTGTGACTGCTGATCCTGAGATCCGAGCCCTTGCATTAAATACGTTAAATGCTTTGAAGCGCTCTGTCAAGGCTGGTCCTAGGCATATAATACCTGGGCCTATTGAGATTGAAGCTCTGTTGACTGGGAGAAAGCTTACAACTATAGTGTTCTTCCTGGATGAAACATTTGAGGAAATTACATATGACATGTCAACAACAGTTGCTGATGCTGTTGAGGAATACATTGGGTTAGATGATAATAAACATATCGGGGATCTCCTTGCGGAATTTAAGGCGGTGAAAGATCGAAGTAAGGGAGAAATTTTACAATGTAAACTGATATTCAAGAAAAAGTTATTTCGTGAATCAGATGAAGCTGTGACTGATCCAATGTTTATGCAGCTATCCTATGTACAATTGCAACATGATTATATTTTGGGTAATTATCCTATTGGAAGGGATGATGCTTCCAAGCTTTCTGCATTGCAAATCTTGGCTGAGATTGGATTTGTTAGAAGACCTGAATCATGCGCTGACTGGAATTCATTTCTGGAGAGATTTCTGCCTAGACAAATTGCAATGACTCGAGCGAAACGGGAATGGGAGTTGGACATTCTTTCTTGCTATCATTCACTGGAGCATGTGACAAAAGATGATGCAAGACAACAATTTCTGCATATATTGAAAACACTTCCTTATGGGTTTTCTGTTTTTTTCAATGTTCGCAAAATTGATGATCCCATTGGACTCCTGCCTGGACGAATAATATTAGGAATTAACAAGAGAGGGGTTCATTTTTTTCGTCCCATTCCCAAGGAGTATTTGCACTCAGCTGAGTTGAGAGACATCATGCAATTTGGAAGCAGTAATACTGCAGTATTTTTTAAAATGCGAGTTGCAGGTGTTCTGCACATATTCCAGTTTGAAACCAAGCAGGGAGAAGAAATTTGTGTAGCTCTTCAGACACACATAAATGATGTAATGCTGCGCCGTTATTCCAAAGCACGATCTTCTACCAGTAGTTCTTTGAGTGAAGATATTTCTAATAATTTTAAGCCTCCGAATTTGGAATTATATGAAAAACGTGTTCAAGAATTATCAAAAGTTGCTGAAGAGTCTCAAAGAAATGCTGAGCAATTGCTGGAAAAATTGCATGAAAAGCAAAAACAAGAAGAGGAAATGCTACAAGAATTAGAGGGCTTGAAAGATTCTTTAAAAGCTGATAAGCATAGTCTTGCAGAAGTTACAAATGAACGAGATAGGCTTAAATCATTATGCAATGAAAAAGATAAGGCACTTCAGGCTAAAATTCTGGAGAAAAGAAGCATGGAGGAAAAGATGGCCAAGTTGAGTAATTTGGTGATGGAGAGCACTGCCAAAAAAGACCCCATTGGTGCAAATAATGAAGTGTTACAAAAGCTTGAAGATGACCTAAAACTTTGTAAAGATGAGCATCGTTTAGCTGAAGAGACAATCAAAAGCTTGACAAACGAAAAGTTAATTTTGGCACAAAAGCTATCTGAGCTTGAGGAGAAGAAAGCTGAAGAGATTAGTTCTCTTCAAAGGAAACTTGACCAAGAACGCAAAGCTCTGAACTCTCAAGTGTATGACCTTGAAAGAAAACTGAATATGTTTAGACAAGAATTAGTTGCAGCTGAGTCTACACTTTCAGTAAAGGACTCTGAATTGGCTGCATTGAAGAACAATTTAAAAGAACTAGAAGAATTAAGAGAAATGAAAGAGGACATTGATAGAAAAAATGAACAAACAGCTTCCATATTGAAGATGCAAGGGGCTCAACTAGCTGAATTGGAAATGCTTTATAAGGAGGAGCAGGTTCTCAGGAAGCGATATTTTAATACCATAGAAGATATGAAAGGCAAAATAAGAGTTTACTGTCGACTAAGACCTCTTGGTGAAAAAGAGATTGCTGACAAAGAAAGAGATGTTCTTACTACTGTAGATGAGTTTACAGTTGAGCATCCATGGAAAGATGACAAACCAAAACAACACATATATGATCGCGTGTTTAATGGTGATGCCACTCAAGAAGATGTATTTGAGGATACAAGGTACTTGGTGCAATCTGCTGTAGACGGTTATAACGTTTGCATATTTGCGTATGGTCAAACTGGCTCTGGAAAGACATTTACAATTTATGGATCTGAAAACAATCCTGGCCTTACCCCGCGTGCTACAGCAGAACTTTTCAGAATTTTAAGGAGAGATGGTAACAAGTTTTCTTTTTCCTTGAAGGCATGCATGTTGGAATTATATCAAGATACACTTGTAGATCTTCTATTACCTAAGAATGCAAAGCGATTAAAATTGGAGATTAAAAAGGATTCAAAGGGAATGGTAGCAGTAGAAAACGTAACAGTTGTGTCAATTTCTACCATGGAGGAATTGAATAGCATAATACGAAGGGGGTCTGAACGACGACATACATCAGGGACACAAATGAATGAAGAAAGCTCTAGATCCCATCTTATATTATCCATTGTTATTGAAAGTATCAACCTTCAAAGTCAATCAGCTGCAAGGGGAAAGCTAAGTTTTGTGGATCTTGCTGGTTCAGAGAGAATAAAAAAGTCAGGCTCTGAAGGTAGTCAACTCAAAGAAGCTCAAAGTATAAACAAATCATTATCAGCACTTGGAGATGTCATTAGTGCTTTATCTTCTGGTGGCCAACACATCCCTTATAGAAATCACAAGTTAACTATGTTGATGAGTGATTCACTTGGGGGTAATGCCAAAACTCTCATGTTTGTGAATGTATCTCCAGCAGAGTCAAGCTTGGATGAGACACACAACTCCCTTATGTATGCATCACGAGTGAGATCAATTGTGAATGATCCAAGCAAAAATGTTTCTTCAAAAGAGATAACTCGACTGAAGAAATTGGTTGCATATTGGAAGGAGCAAGCAGGTAGGAGAGGAGATGATGAAGATTTAGAAGAAATCCAAGAAGTACGGCCAACTAAAGAGAGGAGTGATGGGCGCCATTCTATGTAG 3708 0.3843 MAIDMPLSGAQSVRTNRSSFGSSNGNGDTPLHNYATVSNGDDYDSDGGNFAPPTPTTLSMAIPADLAGAVPLINRFQVEGFLKLMQKQIHSAGKRGFFSKRSVGPQVREKLTFEDMLSFQKDPIPTSLLKLNSDLASRATKLFQIILKYIGVDSSDNVTQMSLEERVELVGKLYKQSLKRSELRDELFVQISKQTRNNPERECLIKAWELMYLCALCMPPSKDIGGYLSEYIHNVAHGVTADPEIRALALNTLNALKRSVKAGPRHIIPGPIEIEALLTGRKLTTIVFFLDETFEEITYDMSTTVADAVEEYIGLDDNKHIGDLLAEFKAVKDRSKGEILQCKLIFKKKLFRESDEAVTDPMFMQLSYVQLQHDYILGNYPIGRDDASKLSALQILAEIGFVRRPESCADWNSFLERFLPRQIAMTRAKREWELDILSCYHSLEHVTKDDARQQFLHILKTLPYGFSVFFNVRKIDDPIGLLPGRIILGINKRGVHFFRPIPKEYLHSAELRDIMQFGSSNTAVFFKMRVAGVLHIFQFETKQGEEICVALQTHINDVMLRRYSKARSSTSSSLSEDISNNFKPPNLELYEKRVQELSKVAEESQRNAEQLLEKLHEKQKQEEEMLQELEGLKDSLKADKHSLAEVTNERDRLKSLCNEKDKALQAKILEKRSMEEKMAKLSNLVMESTAKKDPIGANNEVLQKLEDDLKLCKDEHRLAEETIKSLTNEKLILAQKLSELEEKKAEEISSLQRKLDQERKALNSQVYDLERKLNMFRQELVAAESTLSVKDSELAALKNNLKELEELREMKEDIDRKNEQTASILKMQGAQLAELEMLYKEEQVLRKRYFNTIEDMKGKIRVYCRLRPLGEKEIADKERDVLTTVDEFTVEHPWKDDKPKQHIYDRVFNGDATQEDVFEDTRYLVQSAVDGYNVCIFAYGQTGSGKTFTIYGSENNPGLTPRATAELFRILRRDGNKFSFSLKACMLELYQDTLVDLLLPKNAKRLKLEIKKDSKGMVAVENVTVVSISTMEELNSIIRRGSERRHTSGTQMNEESSRSHLILSIVIESINLQSQSAARGKLSFVDLAGSERIKKSGSEGSQLKEAQSINKSLSALGDVISALSSGGQHIPYRNHKLTMLMSDSLGGNAKTLMFVNVSPAESSLDETHNSLMYASRVRSIVNDPSKNVSSKEITRLKKLVAYWKEQAGRRGDDEDLEEIQEVRPTKERSDGRHSM 1235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi744g00029 1235 Pfam FERM central domain 355 469 IPR019748 -
Sebi744g00029 1235 ProSiteProfiles FERM domain profile. 272 563 IPR000299 GO:0005856
Sebi744g00029 1235 FunFam Kinesin-like calmodulin binding protein 352 463 - -
Sebi744g00029 1235 SUPERFAMILY Prismane protein-like 802 863 IPR011254 GO:0003824|GO:0016491
Sebi744g00029 1235 MobiDBLite consensus disorder prediction 1 34 - -
Sebi744g00029 1235 ProSiteProfiles MyTH4 domain profile. 119 278 IPR000857 GO:0005856
Sebi744g00029 1235 PANTHER KINESIN-LIKE PROTEIN KLP-3 575 1221 IPR027640 GO:0003777|GO:0007018
Sebi744g00029 1235 FunFam Kinesin-like calmodulin-binding protein (ZWICHEL) 467 576 - -
Sebi744g00029 1235 MobiDBLite consensus disorder prediction 1207 1235 - -
Sebi744g00029 1235 Pfam Kinesin motor domain 865 1180 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi744g00029 1235 Gene3D - 1183 1231 - -
Sebi744g00029 1235 CDD KISc_C_terminal 857 1182 - -
Sebi744g00029 1235 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 859 1207 IPR027417 -
Sebi744g00029 1235 SUPERFAMILY Second domain of FERM 347 464 IPR035963 -
Sebi744g00029 1235 PRINTS Kinesin heavy chain signature 1081 1099 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi744g00029 1235 PRINTS Kinesin heavy chain signature 931 952 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi744g00029 1235 PRINTS Kinesin heavy chain signature 1050 1067 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi744g00029 1235 PRINTS Kinesin heavy chain signature 1130 1151 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi744g00029 1235 Coils Coil 587 691 - -
Sebi744g00029 1235 Gene3D - 361 462 IPR014352 -
Sebi744g00029 1235 ProSitePatterns Kinesin motor domain signature. 1080 1091 IPR019821 GO:0003777|GO:0005524|GO:0007018
Sebi744g00029 1235 SMART kinesin_4 857 1188 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi744g00029 1235 Gene3D MyTH4 domain 98 280 IPR038185 -
Sebi744g00029 1235 SMART B41_5 279 469 IPR019749 -
Sebi744g00029 1235 Coils Coil 702 779 - -
Sebi744g00029 1235 CDD FERM_B-lobe 364 462 IPR019748 -
Sebi744g00029 1235 Gene3D - 467 576 IPR011993 -
Sebi744g00029 1235 ProSiteProfiles Kinesin motor domain profile. 859 1180 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi744g00029 1235 CDD FERM_C_KCBP 467 567 - -
Sebi744g00029 1235 FunFam Kinesin-like calmodulin-binding protein (ZWICHEL) 98 280 - -
Sebi744g00029 1235 Gene3D Kinesin motor domain 846 1182 IPR036961 -
Sebi744g00029 1235 MobiDBLite consensus disorder prediction 9 34 - -
Sebi744g00029 1235 SMART MyTH4_1 119 278 IPR000857 GO:0005856
Sebi744g00029 1235 Pfam MyTH4 domain 172 276 IPR000857 GO:0005856
Sebi744g00029 1235 Coils Coil 787 824 - -
Sebi744g00029 1235 SUPERFAMILY PH domain-like 469 557 - -
Sebi744g00029 1235 FunFam Kinesin-like calmodulin-binding protein 803 1182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi744g00029 Sebi-Chr744 295168 304742 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi744g00029 34 1230 Calmodulin-binding Proteins AT5G65930 70.726 0.0 1768