Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi744g00021 ATGGCAGCATCAGTGGGGGGTGACATATGGAAGGCCCATTTGGCCATGGCGTTGGTTCAGCTATTCAATGGCGGTTACCATGTCATCACCAAGGTGGCCCTTAATGTTGGCATCAACCAATTAGTCTTCTGTGTCTTCCGTGATCTCCTTGCCCTTACAATCCTTGCACCCCTTGCTTATATCCGTGAAAAGTATGATCCTTTTCCCCCTCTTTCTCTGCGTTCTTTTCAAATCAACCATCAGCGATTATACTTGTTCTGTGTGCAACCCCTTTTATTCTTCTGTGTTTCTCGGTTGGATTGGATGCAATTGAAAGATGTGTCACACCTAAGGGGAGCTGGGTTAATCTATGTTGACAATGACATGCTTAACTCCATTATTATCATGTATGAGGACGACTGGCGGATACGGCCACCCATTACTAAGAACCTCCTGATGTCATTCTTCTTTCTTGGATTAACTGGGATATTTGGCAACCAACTTTTGTTTCTTATTGGTTTGAGCTATACTAATCCAACTTATGCTGCTGCCACACAACCAGCCATTCCAGTCTTTACATTTCTGTTGGCTGTCATGATGGGTACAGAAAGAGTGAACTTACTCAGATATGATGGTCTTGCAAAGGTTGGAGGAACTATTATCTGTGTTTCAGGTGCCATATTGATGGTTTTGTATCGTGGTCCAGTTTTGATAGGACGTGAAGAAATTGATCGGGTAGTACAAAATGAAATAAGTGCCAGAGGTCAGCCAGAGCCTTCTGGATGGTTAATGGGTGGTTTACATGATCTTGGGTTAGACCATTTTCATATTGGGGTTCTGTGCTTGATAGGGAACTGCATGTGCATGGCTGCTTTTCTAGCCATTCAGGCACCAGTATTAAGAAAATATCCCGCAAACATATCTGTCACAGCATATTCATACTTCTTCGGAGCTGCACTGATGGTGACAGTGTCTTTGTTCATGACTGATGAGTCAACTGACTGGAGTTTGACATCATCAGAAATACTTGCTGTTACTTACGCGGGAACTATTGCATCTGCCCTTAATTATGGACTCATTACATGGTGCAACAAGATCTTGGGGCCAGCTTTGGTTGCCCTTTACAATCCACTTCAACCTGCCTTTTCTGCCCTTCTGTCCCAAATTTTCCTTGGAAGTCCAATTTACTTGGGAAGTATCATAGGGGGATCTTTCATCATTGCTGGTCTATATACGGTTACTTGGGGATCATATAAAGAAAAACAGGCAACTGTTGGAGTTACTCCTCATGGTTCTTGGGTCGCTGAACCACTTATTCATGAAAAAAGTGCATACATTTTTTCGGGGCCCTCCAGTGTATCCCCAAATCCAAAGCCATCTGATTAA 1365 0.4322 MAASVGGDIWKAHLAMALVQLFNGGYHVITKVALNVGINQLVFCVFRDLLALTILAPLAYIREKYDPFPPLSLRSFQINHQRLYLFCVQPLLFFCVSRLDWMQLKDVSHLRGAGLIYVDNDMLNSIIIMYEDDWRIRPPITKNLLMSFFFLGLTGIFGNQLLFLIGLSYTNPTYAAATQPAIPVFTFLLAVMMGTERVNLLRYDGLAKVGGTIICVSGAILMVLYRGPVLIGREEIDRVVQNEISARGQPEPSGWLMGGLHDLGLDHFHIGVLCLIGNCMCMAAFLAIQAPVLRKYPANISVTAYSYFFGAALMVTVSLFMTDESTDWSLTSSEILAVTYAGTIASALNYGLITWCNKILGPALVALYNPLQPAFSALLSQIFLGSPIYLGSIIGGSFIIAGLYTVTWGSYKEKQATVGVTPHGSWVAEPLIHEKSAYIFSGPSSVSPNPKPSD 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi744g00021 454 Pfam EamA-like transporter family 126 223 IPR000620 GO:0016020
Sebi744g00021 454 Pfam EamA-like transporter family 270 407 IPR000620 GO:0016020
Sebi744g00021 454 SUPERFAMILY Multidrug resistance efflux transporter EmrE 309 412 - -
Sebi744g00021 454 PANTHER WAT1-RELATED PROTEIN 14 87 IPR030184 GO:0016020|GO:0022857
Sebi744g00021 454 SUPERFAMILY Multidrug resistance efflux transporter EmrE 138 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi744g00021 Sebi-Chr744 244075 248187 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi744g00021 165 436 Nodulin-like Gene Family AT5G45370 63.768 7.53e-124 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi744g00021 - - qsa:O6P43_025007 560.451