Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi744g00017 ATGTTGGGGCAGTACATGGAGTTGCAAAGAGAAGACCATACTGATGGGATCACAGGTGTGCTCTTGGAGGCCGTTCTCAGTGGTAAACTATCTGGAAAGATCACATACAACGGTCAGCCTTTCTCAGGTGCCATAAAAAGAAGAACAGGTTTTGTGGCTCAAGATGATGTGCTATACCCTCATCTCACTGTCAGTGAAACTCTAATGTTCACTGCACTACTGAGGCTACCAAACAGTTTGACCAGAGAAGAAAAAGTTGAGCATGTAGAGAGAGTAATCACTGAGTTAGGACTGACTCGTTGCAGGAACAGCATGATAGGAGGCCCACTTTTGAGAGGAATATCAGGTGGAGAGAAAAGGAGGGTGAGCATAGGCCAAGAGATGCTCATCAATCCTAGCCTCTTGTTGCTAGATGAGCCCACTTCAGGTTTGGATTCCACCACAGCATTAAGGATCCTAAACACCATCAAACGCCTAGCAAGTGGGGGAAGAACTGTTATCACCACCATTCATCAACCTTCTAGTCGCCTCTACTATATGTTTGACAAGGTGGTCTTGCTCTCTGAAGGCTGTCCTATCTATTATGGTCCTGCTTCAACTGCTCTTGAGTACTTTTCATCTGTTGGTTTTTCCACATGTGTGACTGTCAATCCAGCTGATCTCTTGCTTGATCTTGCCAACGGGATTGGCCCGGACTCCAAGCATGTAACTGAACAAAGTGAGGGCCTGGAACAGGAGAGGAAGATGGTGAGAGAATCTCTCATCTCTGCTTATGAAAAGAACATAGCTACAAGGCTGAAAGCTGAAGTTTGCAGCCTGGAGGTGAACAACTACAACATCACAAAAGATGCTTGCACAAGAAGTCCCATAAAACCAGAGCAATGGAGCACAAGCTGGTGGCATCAGTTCAAGGTATTATTACAGAGAGGAGTTAGGGAGCGAAGGTATGAAGCCTTCAACAGACTGAGAATATTCCAAGTCATAAGTGTCGCTTTCCTTGGTGGACTCTTGTGGTGGCATACACCAGAGTCACACATTCAAGACCGGGTTGCCTTGCTTTTTTTCTTCTCTGTTTTCTGGGGATTCTACCCTCTCTATAATGCAGTTTTCACATTTCCTCAAGAGAGGAGAATGCTAATCAAGGAAAGGTCATCAGGAATGTACCGCCTTTCTTCCTACTTTCTAGCTAGAACAATAGGAGACTTGCCACTGGAGCTTGCACTTCCAACAGCATTTGTTTTCATAATCTATTGGATGGGAGGGCTTAAACCTGATCCTGTGACTTTTATCCTTTCTCTTCTTGTGGTTCTTTACAGTGTTGTTGTCTCTCAAAGTCTTGGCCTAGCATTTGGTGCTATTTTGATGGAGATTAAACAGGCCACTACTCTAGCTTCTGTGACAACCCTTGTATTTCTCATTGCTGGAGGGTACTATGTACAGCAGATTCCTCCCTTCATAGTGTGGCTCAAGTACTTGAGCTATAGCTACTACTGTTACAAGCTTCTTCTGGGTGTCCAATACAATGAAGATGATTATTATGAGTGCTCACAGGGACAGTTGTGCAAGGTTACAGATTTTCCTCCTATCAAGTCAATGGGTTTGAATCATCTGTGGATTGATGTGTCCATCATGGCCTTGATGTTGGTGGGTTATCGACTACTTGCATATTTAGCACTGCGTAGAGTTAGGTAG 1692 0.4444 MLGQYMELQREDHTDGITGVLLEAVLSGKLSGKITYNGQPFSGAIKRRTGFVAQDDVLYPHLTVSETLMFTALLRLPNSLTREEKVEHVERVITELGLTRCRNSMIGGPLLRGISGGEKRRVSIGQEMLINPSLLLLDEPTSGLDSTTALRILNTIKRLASGGRTVITTIHQPSSRLYYMFDKVVLLSEGCPIYYGPASTALEYFSSVGFSTCVTVNPADLLLDLANGIGPDSKHVTEQSEGLEQERKMVRESLISAYEKNIATRLKAEVCSLEVNNYNITKDACTRSPIKPEQWSTSWWHQFKVLLQRGVRERRYEAFNRLRIFQVISVAFLGGLLWWHTPESHIQDRVALLFFFSVFWGFYPLYNAVFTFPQERRMLIKERSSGMYRLSSYFLARTIGDLPLELALPTAFVFIIYWMGGLKPDPVTFILSLLVVLYSVVVSQSLGLAFGAILMEIKQATTLASVTTLVFLIAGGYYVQQIPPFIVWLKYLSYSYYCYKLLLGVQYNEDDYYECSQGQLCKVTDFPPIKSMGLNHLWIDVSIMALMLVGYRLLAYLALRRVR 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi744g00017 563 Pfam ABC-2 type transporter 302 507 IPR013525 GO:0016020|GO:0140359
Sebi744g00017 563 Pfam ABC transporter 30 142 IPR003439 GO:0005524
Sebi744g00017 563 ProSitePatterns ABC transporters family signature. 114 128 IPR017871 GO:0005524|GO:0016887
Sebi744g00017 563 Gene3D - 19 208 IPR027417 -
Sebi744g00017 563 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 25 556 - -
Sebi744g00017 563 Pfam ABC-2 type transporter 171 245 IPR043926 GO:0140359
Sebi744g00017 563 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 3 214 IPR003439 GO:0005524
Sebi744g00017 563 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 30 206 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi744g00017 Sebi-Chr744 189566 192121 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi744g00017 31 190 Calmodulin-binding Proteins AT2G36910 28.571 1.36e-08 56.2