Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi743g00014 ATGGCACAAACAGTCCCAGTGAAAGTAGGAATTGTGGTTGATGTTGGAGGAATATATGGGAAGATGGGGTTGAGTTGCATCAACATGGCCATCTCTGATTTCTATCAAACACATTCTCATTACCATACCCGCCTTCTCTTCAACGTCAGGGACTCCCAAGGAGATGTTGTTACTGCTGCTGCTCAAGCTCTAGATCTAATAAAAAATGAGGAAGTGGAAGCCATCATAGGACCAATAACATCAATGGAGGCCAACTTTGTGATCAAGCTTGGAGAGAAAACTCATGTCCCCATCATAACATTTTCAGCCACAAGTCCTTCACTAACTTCTCTAAGGAGCCAATATTCATTTCGTATATCACAAAATGATTCATCTCAAGTAAATGCCATAACCTCAATTATCCAAGCTTTTGGGTGGAAAGCAATAGTTCCCATTTACATAGACAATGATTATGGAAAAGGAATCATACCCTTTCTCACCACTTCTTTACAACAAGTCTATATCCGCATTCCATATCTCAGTGCCATTTCATCTTCAGCCACAGATGATGACATTAGAGAAGAACTTTACATGTTGATGACTATGCAAACTCGAGTGTTTATTGTTCATATGTCTCCCAATCTTGCCTCTAGGCTCTTAACCATAGCAAAAGAGATTGGAATGATGAATGAAGGTTATGTTTGGATTGTAACTGATAGCATGGCTAATGTATTATCATCCTCTTTGGATTCCCAACTCATCAAAGAATCAATGCAGGGAGTACTTGGTGTTAAGACTTATATTCCAAGAACAGAGAAGTTTGATGATTTTAAAGCTAGATGGAGAAGAAAATTCCTTCAAGAATATCCAACACTTGTTGATACAAAGTTGGATGCTTTTGGAGTGTGGGCCTATGATGCCACCATTGCATTAGCAATGGCTGTGGAGAAAGTTGGAGGAACCAACTTCAAGGGTTCAAGAAACATGAGTGGTCTTGGAAGTCTTGGAGTTTCTCAAAGTGGTGAAAAGCTAAGTGAGATTTTGTCAAGTACTAGATTCATTGGCCTCAGTGGAGAGATCAGTTTGATTGATGGGCAATTGCAAGCTTCCACCTTTGAGATAATCAATGTGAATGGCAATGGGGAAAGGAGGGTAGGGTTTTGGACATCACAGAATGGGTTAGTAAGGGATCTGAATGTAGCAAATACAAACACTACATATTCTGTTTCAAAGAACAATTTAGGACCCATTATTTGGCCAGGGGATACTTATTCTATTCCAAAAGGTTGGGAAGATCCAACAAATGCAAAGAAGTTAAAGATAGGAGTACCAGTGAGAAAAGGTTTCACTGAATTTGTGAAGGTTACTTGGAATCCCAATACTAATACATCAGAGGTAACTGGTTTCAGCATTGATGTTTTCAAGGCTGCATTGGAATTGTTGCCTTATGCCCTTCCATATGAATTCATCCCATTTGCAAAGGCTAATGGGGAGAGTGCTGGATCATACAATGAGTTGGTCAGCCAAGTTTATTTTGGGAACTTTGATGCTGTAGTGGGAGATCCAACAATTACTGCAAACAGATCCAAGTATGTGGACTTTACTATGCCATACACTGAATCAGGTGTAACTATGATTGTTCCATTGAAAGCAAACAAGCCAGGGAATGCATGGGCTTTCTTGAAGCCATTGACATGGAATCTTTGGGCAGCTACTGCTTTTTCCTTCATATTTGTTAGTTTTGTGGTTTGGGTCCTTGAACACCGTATAAATGAAGATTTTCGAGGTCCTCCTTTGCATCAAATTGGTACCAGCCTATGGTTTTCTTTCTCAGTGGTTGTCTTTGCCCATAGGGAGAAGGTAGTGAGCAACTTAGCTAGATTTGTTGTGATTGTATGGGTTTTTGTGGTACTGATATTGGTTCAAAGCTACACAGCAAGTTTGACTTCATTCTTAACAGTTCAGAAGCTTAGTCCAACTCTCACAAATGTGAATCAGCTTATGAAGAATGGGCTTAATGTTGGGTACCCTGAAGGTTCTTTTGTGTATGGGATGTTAAAGAACATGGGATTCCAAGATTTCCAGCTTAAACCTTATATTTCTACAGAAGAATGTGATGACCTCTTCACAAAAGGAAGTGGAAATGGTGGCATTGCTGCTGCTTTTGATGAAACCCCATATTTGAAGTTGATTCTTGAAACTTATTGCTCCAAGTATATCATGGTTGGTCCCACATTTAAAACTGATGGCTTTGGTTATGTTTTCCCTAGAGGTTCACCTTTAGTAGCTGACATTTCAAGGGCAATTTTGAATGTGACACAAGGAGACAGAATGAAAACAATTGAGAATGCATGGTTCAGGAAAAGCAATTGTCCAGATACTAATTCCTCAAATTCTGCAGACAATCTTGGCCTTAATAGCTTTTGGGGACTTTTCCTTATAGCAGGGTCTAATTCTAACACTTCAATGAGTAAACGAATTGGTTCCATGCTTAGCATATTTGACCAAAAAGACCCGAGTTCCCATGCTTTCAGAAAGAAAATGATGCAAGGTGAAAGTGAAAATAGCAGCACTCATCATCATGGATTAGGAGGACAAGTTGTTGAGTCCTCTACAAGTACTCATTGCCCACCAAGTCCTTCTCCCTCAGGTCAAAGTCAAACGGAATCAAACTTCTCCTTTTATGGAGATCATGGAATGTTTTCTCCAGAGTACCATGGTGATGTTAATCTATATGGCCATGAACCTCATGACATGGAGATAACCATTGTGCAAAATGTTCCATCTACAACTCTGGAATTGGAAGCATCCCCTGCACAAAACTGA 2805 0.3975 MAQTVPVKVGIVVDVGGIYGKMGLSCINMAISDFYQTHSHYHTRLLFNVRDSQGDVVTAAAQALDLIKNEEVEAIIGPITSMEANFVIKLGEKTHVPIITFSATSPSLTSLRSQYSFRISQNDSSQVNAITSIIQAFGWKAIVPIYIDNDYGKGIIPFLTTSLQQVYIRIPYLSAISSSATDDDIREELYMLMTMQTRVFIVHMSPNLASRLLTIAKEIGMMNEGYVWIVTDSMANVLSSSLDSQLIKESMQGVLGVKTYIPRTEKFDDFKARWRRKFLQEYPTLVDTKLDAFGVWAYDATIALAMAVEKVGGTNFKGSRNMSGLGSLGVSQSGEKLSEILSSTRFIGLSGEISLIDGQLQASTFEIINVNGNGERRVGFWTSQNGLVRDLNVANTNTTYSVSKNNLGPIIWPGDTYSIPKGWEDPTNAKKLKIGVPVRKGFTEFVKVTWNPNTNTSEVTGFSIDVFKAALELLPYALPYEFIPFAKANGESAGSYNELVSQVYFGNFDAVVGDPTITANRSKYVDFTMPYTESGVTMIVPLKANKPGNAWAFLKPLTWNLWAATAFSFIFVSFVVWVLEHRINEDFRGPPLHQIGTSLWFSFSVVVFAHREKVVSNLARFVVIVWVFVVLILVQSYTASLTSFLTVQKLSPTLTNVNQLMKNGLNVGYPEGSFVYGMLKNMGFQDFQLKPYISTEECDDLFTKGSGNGGIAAAFDETPYLKLILETYCSKYIMVGPTFKTDGFGYVFPRGSPLVADISRAILNVTQGDRMKTIENAWFRKSNCPDTNSSNSADNLGLNSFWGLFLIAGSNSNTSMSKRIGSMLSIFDQKDPSSHAFRKKMMQGESENSSTHHHGLGGQVVESSTSTHCPPSPSPSGQSQTESNFSFYGDHGMFSPEYHGDVNLYGHEPHDMEITIVQNVPSTTLELEASPAQN 934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi743g00014 934 FunFam Glutamate receptor 330 430 - -
Sebi743g00014 934 MobiDBLite consensus disorder prediction 836 886 - -
Sebi743g00014 934 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 7 811 IPR015683 -
Sebi743g00014 934 FunFam Glutamate receptor 550 680 - -
Sebi743g00014 934 Gene3D - 551 674 - -
Sebi743g00014 934 CDD GluR_Plant 430 779 - -
Sebi743g00014 934 Gene3D - 124 290 - -
Sebi743g00014 934 MobiDBLite consensus disorder prediction 848 886 - -
Sebi743g00014 934 Pfam Ligand-gated ion channel 781 809 IPR001320 GO:0015276|GO:0016020
Sebi743g00014 934 SMART GluR_14 431 781 IPR001320 GO:0015276|GO:0016020
Sebi743g00014 934 Gene3D - 326 430 - -
Sebi743g00014 934 SUPERFAMILY Periplasmic binding protein-like I 7 423 IPR028082 -
Sebi743g00014 934 CDD PBP1_GABAb_receptor_plant 8 391 IPR044440 -
Sebi743g00014 934 FunFam Glutamate receptor 2.7 687 786 - -
Sebi743g00014 934 Gene3D - 431 550 - -
Sebi743g00014 934 Pfam Receptor family ligand binding region 26 373 IPR001828 -
Sebi743g00014 934 Pfam Bacterial extracellular solute-binding proteins, family 3 455 780 IPR001638 -
Sebi743g00014 934 SUPERFAMILY Periplasmic binding protein-like II 410 781 - -
Sebi743g00014 934 FunFam Glutamate receptor 427 549 - -
Sebi743g00014 934 PIRSF IGluLR_plant 2 886 IPR017103 -
Sebi743g00014 934 Gene3D - 726 786 - -
Sebi743g00014 934 FunFam Glutamate receptor 126 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi743g00014 Sebi-Chr743 341764 346868 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi743g00014 3 846 Ion Channels AT2G29120 51.197 0.0 874
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi743g00014 K05387 - qsa:O6P43_019170 1173.3