Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi742g00023 ATGTCACAACCAAGGCAAAACAAGATGATGAGTCCAAACTTTGCCAAACATGTTGGTGGTGACACAACTTATACTAAGATCTTTGTTGGAGGATTAGCTTGGGAGACTAAGAGAGACACACTGAAACACTATTTTGATCAATTTGGAGAGATCTTAGAAGCTGTTGTCATCACTGACAGAAACACTGGAAGATCAAAAGGATATGGCTTTGTGACCTTTAAGGACCCAAATTCTGCAATCATTGCTTGCCAGAATCCCTATCCTGTGATTGATGAAAGGAGAGCTAATTGTAATCTTGCAGCTCTAGGTGCACAAAAATCTGATCCATCAATAACAGGAAGACAGAAATTCAGTAGCCCTTCATGGAACACTGTACCAATTCAATTTCAAGGCACCTCCACTTATTATAATCAGAATATACCACAGTATACAATTCCCTATCCAGCCTACAGGTATCCTGGTTATCCTCGCCCACAAGACATTTACGAAATGAATTACTATAATGCATATGGTGGACAACAGTTTCCATTTCGCTGGGTTCCAGCATATTGCCAACCCTTTTATGGTCTTAGTAGACAGTTTGTTCCACCAGCTTATGTGAAAAAGTCACAACTCCCTGATATGTCACCACAGGAGTTCACAGTTGTTGGCTTATCAGAACCTATTTCACATTCTCCTTCAATTTCAAGCACTGAAACAGGAGCTGCAACAGGAGTGATAGGATCACCCCAAGAACAGGAATCTTCAGCTTAA 753 0.4064 MSQPRQNKMMSPNFAKHVGGDTTYTKIFVGGLAWETKRDTLKHYFDQFGEILEAVVITDRNTGRSKGYGFVTFKDPNSAIIACQNPYPVIDERRANCNLAALGAQKSDPSITGRQKFSSPSWNTVPIQFQGTSTYYNQNIPQYTIPYPAYRYPGYPRPQDIYEMNYYNAYGGQQFPFRWVPAYCQPFYGLSRQFVPPAYVKKSQLPDMSPQEFTVVGLSEPISHSPSISSTETGAATGVIGSPQEQESSA 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi742g00023 250 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 27 84 IPR000504 GO:0003723
Sebi742g00023 250 SUPERFAMILY RNA-binding domain, RBD 3 104 IPR035979 GO:0003676
Sebi742g00023 250 CDD RRM_RBM24_RBM38_like 25 100 - -
Sebi742g00023 250 Gene3D - 1 115 IPR012677 -
Sebi742g00023 250 PANTHER BOULE-RELATED 12 214 - -
Sebi742g00023 250 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 25 102 IPR000504 GO:0003723
Sebi742g00023 250 SMART rrm1_1 26 98 IPR000504 GO:0003723
Sebi742g00023 250 MobiDBLite consensus disorder prediction 222 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi742g00023 Sebi-Chr742 347131 348629 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi742g00023 21 101 C2H2 Transcription Factor Family AT2G19380 43.210 5.09e-15 72.4