Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi742g00011 ATGATGATCCACATTAGACTTATTTTGCTCTTATGTTTCTTACTTCATTATTTTCGTGGCATCCTATGCAACAACAACACAGATAAAGATATCCTTCTTTCTTTCAAATTCCAAGTGACTGACCCAAATAATGCTCTCTCTGGATGGTTAACAGATTCCAATCACTGCAACTGGTACGGTGTCACCTGTTCCAATCTTGGAAACAGAGTCCAATCTCTCAACCTATCACGACTTGGCCTCTCTGGTAAACTACCCTCTCAACTCTCCAACCTCACTTACCTTCATTCGCTTGACCTTTCCAAGAACAAATTTCATGGCCAAATTCCCTTCGAGTTTGGCCATCTCTCTCTTCTTAATCTCATTAAATTAGCTTTCAACAATCTCAGTGGCACACTTGCCCTAGCAACCAATAGGTTTGAAGGGGTCATTCCTAGTTCCATTTCCAATGCCTCAAACCTTCAAAAAATTGATCTTACTAACAATAATTTCCATGGCTCCATACCTCTATTCAACAACTTGAAAAATCTTACTCACCTTATTCTTGGTAATAATTATCTCTCTTCCACAAATTCATTGAATTATAAGTTCTTTGATTCCCTTAGAAACTCCACTCAGTTGCAAATTCTCATGATCAATGATAACAATTTGACTGGGGAACTTCCAAGTTCTGTTGCCAATCTGTCTACCAATCTCCAACAGTTCTGTGTTGCTGATAATTGGCTAACTGGCAACATTCCACAAGGGATGAAGAAATTTCAAGATCTCATATCCTTCTCTTTTGAAAGTAACTATTTCACTGGAGAATTACCACTAGAATTAGGAGCTCTAAATAAGCTGGAGCAGCTTTGGATATACAAAATAGATTGTCTGGGGAAATTCCCAATATTTTTGAGATTGAGTTTACTTCACCTGGGAATGAATAGGTTTAGTGGAACCATACCAGAGGAGATTTTTCAGCTTTCTAGCTTAACAACCTTGTACTTAACAGGAAACTCTCTGCATGGTTCACTTCCTCCTGGTGTCAATAACATGGAGCAGCTTGAGACCATGGATATTTCCGACAACCAGCTGTCAGGTGGCTCAATCCCAAATAGTCTAGGGGATATAGCATCCCTTGAGACTTTAGACCTATCATCAAACAATCTCACTGGCCCAATTCCTCAAAGTTTAGAAAAGCTTCAGTATATGGTGATGTTAAATTTGTCTTTCAACCATTTGGAAGGGGTGGTTCCTATGAAAGGTGTTTTTATGAACCTTAGCCGGGTTGATCTTAGAGGTAATAGCAAACTCTGTGGCCTTAACAATGAAATTGTGCAAAAGTTGGGAGTCTCCCTCTGTGTTGTTGCTAAGAAAAAGAGAAATATTTTACTTCCTATCATATTAGCAATAATTACAGGTGCTATTGCTTTGTTCATTTCAATCCTCTACCGAATGTGGGTTCTGATGTCTCGAAAGAAGGAATACAAGCACAGGAAAACAAGTTTGTCATCTGCTCCTCTAATGGGGTTGCCTCAAAATATAACGTATGCTGATATTCGGTTTGCAACAAACAATTTTTCAGCTGAAAACTTGATAGGAAAAGGAGGCTTTGGCTCTGTTTATAAGGGTCTGTTTAGCATGAGCACTGTTGAAACCACTACCCTTGCTATCAAAGTCTTGGACAAGCAACAAAGCAAAGCTTCTCAGAGTTTCAATATAGAATGTGAAGCTTTAAGAAATGTTAGGCATCGGAACCTAGTGAAGGTTATTACTTCTTGCTCCAGCGTTGATTATAAAGGAGATGACTTTAAGGCCCTTGTGATGCAATTCATGGCCAATGGTAATTTGGACATGAGTTTATATCCCAATGATGAAGAGTCAGGATCCTCTCTAACCTTGCTGCAAAGATTAAACATTGCCATTGATGTTGCTTCTGCCATGGACTACTTGCATCATGACTGTGACCCACCAATAGTCCATTGTGATCTGAAGCCTGTCAATGTGCTACTAGATGATGATATGGTTGCACATGTTGCAGATTTTGGATTGGCAAGGTTTCTTTCTCAAAATCCATCAGAGCAACAAAGTAGCACTATGGGACTGAAAGGATCAATAGGCTATATTGCCCCAGAATCCCTAATCTGCCCCTCATTCCTTTTTTTCTCCCTTCTAATTCCTTCTTCTCTTCTCAACGCTTCGCCATCATCCCAAGTCCCAAAAGCTGGTCTTTCTGATACAGAAAGCAAGAGACTGCTTCATCAGGGAAGGGTGGTACGTCAAGTATTCAAGGCTGTCAAATCTATCAATGAAAATGTGTTGCTTGAAATGCCTGTGCCAGCAATTATCAAAGATGCACTTGTAAAGTTTGGGAAGGCAAACCTTGGACAGGAACTGCACAAGGTTTTGACAACTGAATCAAGCTCTGGAGAACACATGCTTAAATCGCTCAATTTGAACTCTAAACACATTGTCCTTGAGACCATTAATAGATTGGAAGCTGCTATATTCTCGTGGAGAGAGAGAATTACTGAACAAATTAGTGGCAAATCCCCAGTTCGAACCTCATGGTCTTTTGTTAAGGACCCTATGTCAGAGGTTGATAAAATGGAGTTATTATTGGACCGTGCAGAAACACTTTTACAGCTGCTTAAAATCAGATATCCAAACCTTCCTAAAACATTTCTGGATGTTGCTAAAGTTCAATATGGCAAGGATATTGGACATTCCATTTTGGAAACTTATTCCAGAGTTCTTGCAAATTTAGCCTTCAGCATATTGTCTAGGATAGGAGATATATTGCAGGAGGATTGTTTAAGCAATCCAAATTCACCTGTGGCCACAAGTTGCTCTCCTGGGATAAATCTCTCAGAAACTTGGGTGGTGGGGTCACATATCAAGCACTCCTTACTTGATAAGATGAACAAGGTAGATGTACAATTTTGTGATTCCAGTTGTGATAGTACTTCTGATTTAGAACTTTCATCTATTGATGCCAAATCCAGTGCTGTGATTGTTACACCAAACCAGAGTCGTGTGTGGTGCATTGGTAGAAAGGCTTGCACAAGTGTGTCTCCTCAAAATTCCCCATAG 3069 0.3969 MMIHIRLILLLCFLLHYFRGILCNNNTDKDILLSFKFQVTDPNNALSGWLTDSNHCNWYGVTCSNLGNRVQSLNLSRLGLSGKLPSQLSNLTYLHSLDLSKNKFHGQIPFEFGHLSLLNLIKLAFNNLSGTLALATNRFEGVIPSSISNASNLQKIDLTNNNFHGSIPLFNNLKNLTHLILGNNYLSSTNSLNYKFFDSLRNSTQLQILMINDNNLTGELPSSVANLSTNLQQFCVADNWLTGNIPQGMKKFQDLISFSFESNYFTGELPLELGALNKLEQLWIYKIDCLGKFPIFLRLSLLHLGMNRFSGTIPEEIFQLSSLTTLYLTGNSLHGSLPPGVNNMEQLETMDISDNQLSGGSIPNSLGDIASLETLDLSSNNLTGPIPQSLEKLQYMVMLNLSFNHLEGVVPMKGVFMNLSRVDLRGNSKLCGLNNEIVQKLGVSLCVVAKKKRNILLPIILAIITGAIALFISILYRMWVLMSRKKEYKHRKTSLSSAPLMGLPQNITYADIRFATNNFSAENLIGKGGFGSVYKGLFSMSTVETTTLAIKVLDKQQSKASQSFNIECEALRNVRHRNLVKVITSCSSVDYKGDDFKALVMQFMANGNLDMSLYPNDEESGSSLTLLQRLNIAIDVASAMDYLHHDCDPPIVHCDLKPVNVLLDDDMVAHVADFGLARFLSQNPSEQQSSTMGLKGSIGYIAPESLICPSFLFFSLLIPSSLLNASPSSQVPKAGLSDTESKRLLHQGRVVRQVFKAVKSINENVLLEMPVPAIIKDALVKFGKANLGQELHKVLTTESSSGEHMLKSLNLNSKHIVLETINRLEAAIFSWRERITEQISGKSPVRTSWSFVKDPMSEVDKMELLLDRAETLLQLLKIRYPNLPKTFLDVAKVQYGKDIGHSILETYSRVLANLAFSILSRIGDILQEDCLSNPNSPVATSCSPGINLSETWVVGSHIKHSLLDKMNKVDVQFCDSSCDSTSDLELSSIDAKSSAVIVTPNQSRVWCIGRKACTSVSPQNSP 1022
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi742g00011 1022 Gene3D Ribonuclease Inhibitor 27 132 IPR032675 -
Sebi742g00011 1022 Pfam Leucine rich repeat N-terminal domain 25 64 IPR013210 -
Sebi742g00011 1022 ProSiteProfiles Protein kinase domain profile. 519 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi742g00011 1022 Pfam Protein tyrosine and serine/threonine kinase 522 706 IPR001245 GO:0004672|GO:0006468
Sebi742g00011 1022 Coils Coil 859 879 - -
Sebi742g00011 1022 PANTHER UNNAMED PRODUCT 80 705 - -
Sebi742g00011 1022 Gene3D PRONE domain, subdomain 2 770 895 - -
Sebi742g00011 1022 SUPERFAMILY RNI-like 72 414 - -
Sebi742g00011 1022 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 187 440 - -
Sebi742g00011 1022 Gene3D Ribonuclease Inhibitor 133 440 IPR032675 -
Sebi742g00011 1022 ProSiteProfiles Leucine-rich repeat profile. 371 394 IPR001611 GO:0005515
Sebi742g00011 1022 ProSiteProfiles PRONE domain profile. 727 939 IPR005512 GO:0005085
Sebi742g00011 1022 FunFam Leucine-rich repeat receptor-like kinase 28 135 - -
Sebi742g00011 1022 SMART serkin_6 519 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi742g00011 1022 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 727 932 IPR005512 GO:0005085
Sebi742g00011 1022 FunFam Rop guanine nucleotide exchange factor 14 802 938 - -
Sebi742g00011 1022 Gene3D Transferase(Phosphotransferase) domain 1 604 712 - -
Sebi742g00011 1022 Gene3D Phosphorylase Kinase; domain 1 503 603 - -
Sebi742g00011 1022 SUPERFAMILY Protein kinase-like (PK-like) 494 708 IPR011009 -
Sebi742g00011 1022 ProSitePatterns Protein kinases ATP-binding region signature. 525 551 IPR017441 GO:0005524
Sebi742g00011 1022 FunFam LRR receptor-like serine/threonine-protein kinase EFR 490 603 - -
Sebi742g00011 1022 ProSitePatterns Serine/Threonine protein kinases active-site signature. 651 663 IPR008271 GO:0004672|GO:0006468
Sebi742g00011 1022 Gene3D PRONE domain, subdomain 1 725 929 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi742g00011 Sebi-Chr742 214072 219146 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi742g00011 48 704 Receptor kinase-like Gene Family AT3G47570 38.057 5.27e-141 446
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Sebi742g00011 PRONE 6.4e-77 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi742g00011 - - mtr:11428205 867.84