Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi742g00008 ATGGTCATAATGTGGCAGTATTTATGTAGTAAGGCTGGTATGAGGGACAAAAAGCATTTGATTAGGTTAGATCGAAAAAAGGAGCACAGACCCCTTACCCGTACCAATTGTCTAGCAAAGTTGAGAGTTAGGTTTGATTACAAGACGGGTAAATGGAAGGTTGTTTCATTTGAAGAATCTCACAACCATGAATTAACCCCTGCAAAGTTTGTACCTCTAATTCCTAATTATATGGGATTGACTGATGGGGACAAAGCCCAAGTGGATGCATTACATTCTCATGGCATTAGGCCTTGCCAGATTATGGGTTTTCTTGTTGATCAAAAAGGAGGGTATAGAAATGTTGGATTTTCAAAGAAAGATTTGTACAACTACATAGATGAGAAGATAGAGCGTCAAGCTTCTAAGGTGTTCACTTTGGATATTTTTAAAGATGTCAAGTATGAGATTGAAAGGGCAGGTGGTTTAAATGTAATTGAGCGTTCAATTGATGGGGATAATGTTGTTTTCAAATTAAATGCATATTGTAAGCCTCGTAGTGAACACTTTGTTGTTTATGATAAAGAGAATTCTAAATTTGTTTGTAATTGTCGGTTGTTTGAATCTTGTGGCATTCCATGTCGACATATTTTTTGTGCTATGAGACTGGAGCACATAGATGCTACACCCCCATGTATGATTTGTAAACGATGGAGGAAGGATGTTAAGAGTGACTTTATGATATCAGATGGTTTGGATGAGGTAAAACCTGACATGATGAGGGTTTGCCGTTTTGTGGTTGCTAGCTCTCATTGTAACAGTATCTGTGATATGGTTTCCCAAAAGCGTGAGCATTTTAAGGAGTTTATAAATGACATTATGAAGCTAAAACTGAAGTATGAGAGATTGTCTTCCAGTAGTAGCACAACTAATGTTGAGGAAAATGTTGTACAAGATCCCACGGTTGTGAAGACGAAAGGTGCTCCTATGAAGACAAGGAAGAGGCGTAAGAGTAAGAGGTGTTCAAACTGTAGCATTTCTGGACATGTTATCACAACCTGTCCTAGGTTGTTTCCACCAGAAGTTGATGAAGTCAACATTAATGACGAAGACCATGGTCCTGAGTCACAAACTCTTAGGAGGGATGCTGCCCAAGTAATTTCCTAG 1146 0.3857 MVIMWQYLCSKAGMRDKKHLIRLDRKKEHRPLTRTNCLAKLRVRFDYKTGKWKVVSFEESHNHELTPAKFVPLIPNYMGLTDGDKAQVDALHSHGIRPCQIMGFLVDQKGGYRNVGFSKKDLYNYIDEKIERQASKVFTLDIFKDVKYEIERAGGLNVIERSIDGDNVVFKLNAYCKPRSEHFVVYDKENSKFVCNCRLFESCGIPCRHIFCAMRLEHIDATPPCMICKRWRKDVKSDFMISDGLDEVKPDMMRVCRFVVASSHCNSICDMVSQKREHFKEFINDIMKLKLKYERLSSSSSTTNVEENVVQDPTVVKTKGAPMKTRKRRKSKRCSNCSISGHVITTCPRLFPPEVDEVNINDEDHGPESQTLRRDAAQVIS 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi742g00008 381 MobiDBLite consensus disorder prediction 361 381 - -
Sebi742g00008 381 Pfam FAR1 DNA-binding domain 3 66 IPR004330 -
Sebi742g00008 381 PANTHER OS01G0519700 PROTEIN 127 330 - -
Sebi742g00008 381 SMART 26again6 193 220 IPR006564 GO:0008270
Sebi742g00008 381 ProSiteProfiles Zinc finger SWIM-type profile. 183 218 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi742g00008 Sebi-Chr742 160478 162473 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi742g00008 FAR1 3.5e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi742g00008 - - ccaj:109806300 192.971