Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi740g00026 ATGGAATTTAATTCCCAAAATTCTCAGAAATCTGAGCATGTAAGATTGATTTGTGATGATCAAGGTGGTCATGGACAAATTAGATCTTATACTTGTGCTTTTTGCAAGAGAGTGTTCTCAAATGCACAGGCACTTGGAGGTCACATGACTACACATAGAAGAGACAGAGCCAAGCTTAGGCAATCTTATGAAGAAAATTTGCTTTCTTTGGACATATCAATCAAGAGCACCACTTATCACGATGAGCCTCAGCCTTTGGAAGAGAATTTTTCGTTTCGATTGGATTATGGTAATCAACAGAAAGATACCAGCAATTGTAAAAAGCCATGCACTTTTTCTGACAAGGATGATCAAAGTGGTAAGGCAATTGGTACTTTAGAATTTCTTCAGCTTCCTTTATTTGTCGGGATGCCATGTTCAAGCAATGAGATAAAGGGAGGTACAATTGTGGTTGAAAGGATTGAAGAGAAGAAAGCTGATTTAGACCTTGAACTTCGTTTAGGCCCTGAGCCGCGGGAGGAACCAACTTTGAGCACAAGAGAATTCTTTTGA 552 0.3913 MEFNSQNSQKSEHVRLICDDQGGHGQIRSYTCAFCKRVFSNAQALGGHMTTHRRDRAKLRQSYEENLLSLDISIKSTTYHDEPQPLEENFSFRLDYGNQQKDTSNCKKPCTFSDKDDQSGKAIGTLEFLQLPLFVGMPCSSNEIKGGTIVVERIEEKKADLDLELRLGPEPREEPTLSTREFF 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi740g00026 183 Gene3D Classic Zinc Finger 4 84 - -
Sebi740g00026 183 Pfam C2H2-type zinc finger 30 54 - -
Sebi740g00026 183 ProSitePatterns Zinc finger C2H2 type domain signature. 32 52 IPR013087 -
Sebi740g00026 183 SUPERFAMILY beta-beta-alpha zinc fingers 28 56 IPR036236 -
Sebi740g00026 183 ProSiteProfiles Zinc finger C2H2 type domain profile. 30 57 IPR013087 -
Sebi740g00026 183 PANTHER OS07G0101800 PROTEIN 1 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi740g00026 Sebi-Chr740 461740 462291 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi740g00026 26 176 C2H2 Transcription Factor Family AT3G53820 36.184 1.77e-15 68.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Sebi740g00026 zf-C2H2_6 6e-07 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi740g00026 - - qsa:O6P43_026481 176.022