Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sebi740g00026 | ATGGAATTTAATTCCCAAAATTCTCAGAAATCTGAGCATGTAAGATTGATTTGTGATGATCAAGGTGGTCATGGACAAATTAGATCTTATACTTGTGCTTTTTGCAAGAGAGTGTTCTCAAATGCACAGGCACTTGGAGGTCACATGACTACACATAGAAGAGACAGAGCCAAGCTTAGGCAATCTTATGAAGAAAATTTGCTTTCTTTGGACATATCAATCAAGAGCACCACTTATCACGATGAGCCTCAGCCTTTGGAAGAGAATTTTTCGTTTCGATTGGATTATGGTAATCAACAGAAAGATACCAGCAATTGTAAAAAGCCATGCACTTTTTCTGACAAGGATGATCAAAGTGGTAAGGCAATTGGTACTTTAGAATTTCTTCAGCTTCCTTTATTTGTCGGGATGCCATGTTCAAGCAATGAGATAAAGGGAGGTACAATTGTGGTTGAAAGGATTGAAGAGAAGAAAGCTGATTTAGACCTTGAACTTCGTTTAGGCCCTGAGCCGCGGGAGGAACCAACTTTGAGCACAAGAGAATTCTTTTGA | 552 | 0.3913 | MEFNSQNSQKSEHVRLICDDQGGHGQIRSYTCAFCKRVFSNAQALGGHMTTHRRDRAKLRQSYEENLLSLDISIKSTTYHDEPQPLEENFSFRLDYGNQQKDTSNCKKPCTFSDKDDQSGKAIGTLEFLQLPLFVGMPCSSNEIKGGTIVVERIEEKKADLDLELRLGPEPREEPTLSTREFF | 183 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sebi740g00026 | 183 | Gene3D | Classic Zinc Finger | 4 | 84 | - | - | |
Sebi740g00026 | 183 | Pfam | C2H2-type zinc finger | 30 | 54 | - | - | |
Sebi740g00026 | 183 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 32 | 52 | IPR013087 | - | |
Sebi740g00026 | 183 | SUPERFAMILY | beta-beta-alpha zinc fingers | 28 | 56 | IPR036236 | - | |
Sebi740g00026 | 183 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 30 | 57 | IPR013087 | - | |
Sebi740g00026 | 183 | PANTHER | OS07G0101800 PROTEIN | 1 | 171 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sebi740g00026 | Sebi-Chr740 | 461740 | 462291 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sebi740g00026 | 26 | 176 | C2H2 Transcription Factor Family | AT3G53820 | 36.184 | 1.77e-15 | 68.2 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Sebi740g00026 | zf-C2H2_6 | 6e-07 | CL0361 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sebi740g00026 | - | - | qsa:O6P43_026481 | 176.022 |