Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi740g00011 ATGGCTCCAGAAATCATGCAACTACAGAAATATGATGCTAAGGCAGATCTCTGGAGTGTTGGTGCAATCTTATTTCAGCTTGTTACAGGAAGAACACCTTTTACTGGAAACAATCAAATACAGTTACTACAGAATATTATGAAATCAACAGAATTGCAATTTCCACCTGATAACCAAAGTTTGAGTTCTGATTGCAAAGATTTGTGTCAGAAATTGCTACGCCGGAATCCAGTGTCCGACCCTTTGAGAAGAACTGAGGAAAATTATCAAGAGGATTGCTTACCTTTCATTCTGGATGACGATTCTAGTGGCCCCGAAGGGAGTCCATCCTTTTCAAGGAAGAAGTCCTCAATGAAGTCTACCTATGGATTTGATCTAAATACAAAATTAGATAAAGTAGAGTCAGTATCTCCTATTTCTAATAACTTAAGTTCTGCTTCCAGATATGGTAGTGTGGCACAGAGACCTGAAACCACTACTAAAAGATTGGACAGCCATAAAAATTTGGGACGAAATATCACTGATCCTCTAGAATCTCCAGATCAGATATTTGCAAACCCTTATCCGAAAGTTACGGATTCACTAGAGAATATTGATCAAGATTATGTTCTTGTGTCTGGGCCCCCTATGGATATTTCATCTTCTTCAGTGAATGCTTCAAAACCCATCCATTCCCTATATAGGTCAGGTAGTTTCCCCCAAGAGTCTTCTAATACAATCACTAGATTAAGTGCTCCAATGCCAATCATTGGTGTACCTACCAATAGCATATGCCAAATTGGAAGTTCAGGTAGTCAGGACTCTCCTCCTGGGACTTCTCATGGATCAATGGATACAGGTGATGAACAGCCATCAGCTCACTGCATGACAAGGGTGAAATCATTGCAACAGTGTGCATCTGCCATCAAGGAATTAGTAATGAAAAGGAATGTGCATTTTATGTGA 945 0.3968 MAPEIMQLQKYDAKADLWSVGAILFQLVTGRTPFTGNNQIQLLQNIMKSTELQFPPDNQSLSSDCKDLCQKLLRRNPVSDPLRRTEENYQEDCLPFILDDDSSGPEGSPSFSRKKSSMKSTYGFDLNTKLDKVESVSPISNNLSSASRYGSVAQRPETTTKRLDSHKNLGRNITDPLESPDQIFANPYPKVTDSLENIDQDYVLVSGPPMDISSSSVNASKPIHSLYRSGSFPQESSNTITRLSAPMPIIGVPTNSICQIGSSGSQDSPPGTSHGSMDTGDEQPSAHCMTRVKSLQQCASAIKELVMKRNVHFM 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi740g00011 314 Pfam Protein kinase domain 1 77 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi740g00011 314 ProSiteProfiles Protein kinase domain profile. 1 97 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi740g00011 314 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 1 308 IPR045269 GO:0004674|GO:0006914
Sebi740g00011 314 MobiDBLite consensus disorder prediction 256 286 - -
Sebi740g00011 314 MobiDBLite consensus disorder prediction 256 280 - -
Sebi740g00011 314 MobiDBLite consensus disorder prediction 96 117 - -
Sebi740g00011 314 Gene3D Transferase(Phosphotransferase) domain 1 1 96 - -
Sebi740g00011 314 SUPERFAMILY Protein kinase-like (PK-like) 1 241 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi740g00011 Sebi-Chr740 215052 217483 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi740g00011 1 77 AGC Kinase Gene Family AT1G48490 36.364 4.88e-11 62.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Sebi740g00011 Pkinase 3.8e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi740g00011 K08269 - gmx:100791596 498.819