Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi73g00083 ATGGGCGTTGGTGGTAATTTCTGGGACCTGTTGAAGCCCTATGCACGCAACGAAGGTTTTCATTTCTTGAGGAACAAGCGAGTTGCTGTGGACCTCTCCTTCTGGATTGTTCAGCACGGGAATGCCATCAAGAACCATGTCAGGAAACCCCACCTCAGGCTCACTTTCTTCCGCACCATCAATCTCTTCTCCAAGGTTTTCTCTCACTCCCTTGATACCCTTCTGTTTACTGAGTACTCATTCATTGTAGTGCTTGAATGGAGTGTCATTGTGATGGAGTTTGGAGCGTTTCCGGTGTTTGTTGTTGATGGGACTCCATCGCCACTGAAATCACAGGCCAGGATTGCAAGGTTTTTTCGATCTTCTGGCATTGAATTGACTAGCTTGCCAGTGCCTGAAGAAGGTGTTTCAGCGGAGAGGAACAATTCATTTTCACGTTGTGTTCAAGAATGTGTGGAACTTCTTGAGCTACTTGGAATGCCTGTATTAACGGCTAAAGGAGAGGCTGAAGCACTCTGCGCCCAATTAAATAATGAAGGTCATGTAGATGCTTGCATCACAGCTGACAGTGATGCATTCCTCTTTGGGGCGAAATGTATTATAAAATGTTTCTCTCCCAGTTCCAAAGAACCATTTGAATGCTACAACATGTCAGATATTGAAGCTGGGCTTGGACTGAAGAGGAAACACTTGATAGCTATCTCACTTTTGGTTGGAAATGATCATGATATGAATGGTGTTCAAGGGATTGGGCTTGATACTGCTCTCCATTTTGTTCAAGTTTTTGGTGAAGATGATATATTGAATAGATTACATGAGATAGCCAAAGGAAAGGCTTCACAAGTTCCTATCAGCATTAGACCTAACGACGATATGGATATGGATGGGAACTCCCCAAATACAAAACAACCTCACTGCTCATTCTGTGGGCATCCAGGCAGCAAAAGAGATCATATGAAGTTTTCCTGCGAATATTGCATCTCAAATGACAATGAAGGTTGCATGAGAAAACCAGAGGGTTTTAAATGTGATTGCGTCTCTTGTGGTATGAATAAGAAACATAAGGAGCAGCAAAGGCTGGAAAATCGGCACTCAAAAATTTGTCAGAAGATTGAAAAAGAGCCAAATTTTCCGAAGGATGAAATCATTGATATGTATTTATGCAATGACAATGGTTATTTTCCTGTAAATGATGGCCCTCAGATCTTTTGGGAAAAACCAAATATTGAGATGCTGATTGATTTTTTAAATTTCCATCAGCACTGGAATCCATCCTACATTCGACGAATGATGTTTCCTATGATGTCCACCATCTTTTTGAGAGATATGGCTACAACTACAGAAAAAAGTTTGTTATTTGGGCAATATGAGTTTGATTCTTTAAAACGTGTGAAGATCAGATATGGACATGAGTTTTATGTTGTCAAGTGGAAACGTGCAGTGGGCAATATTGCCCTTAAAATTCAATCAAATGAAGCTGGCACGCAACAAGATGTTAGAGAGCATGATGAAATGGTGGATCTACTTGATGACTGTGATGTTCCTGAGATTCATGAAGATGATGGATGTAGTTTTCTGTTGACAGACGAAAATATGGACCTTGTAGGCGCAGCTTTTCCGGAAGAAGTCAAAAGATTTTGGCAGGAACAGGAACTGAAGGATATGAAAAAAAGAAAGAATTCAACTCCAAGATCTCAAGAAAATGAAAAATCAGCATCACCAAACTCAAGAAGCATCCAGCTGAACATTACAGAGTTCTACCAATCAACCAAAATTAAACATAATAAATCAAAACAAGGAGAAGAGTCATCCAAGAATGTTGATGATGGCCAAGGCAGTGGAGGCTCAAAAATGAAAAGGAAATCGTCAAGTTCTAATCTTTCAAAATCTGTGAGGCGTCGCCTTTTATTTGATTAA 1917 0.4032 MGVGGNFWDLLKPYARNEGFHFLRNKRVAVDLSFWIVQHGNAIKNHVRKPHLRLTFFRTINLFSKVFSHSLDTLLFTEYSFIVVLEWSVIVMEFGAFPVFVVDGTPSPLKSQARIARFFRSSGIELTSLPVPEEGVSAERNNSFSRCVQECVELLELLGMPVLTAKGEAEALCAQLNNEGHVDACITADSDAFLFGAKCIIKCFSPSSKEPFECYNMSDIEAGLGLKRKHLIAISLLVGNDHDMNGVQGIGLDTALHFVQVFGEDDILNRLHEIAKGKASQVPISIRPNDDMDMDGNSPNTKQPHCSFCGHPGSKRDHMKFSCEYCISNDNEGCMRKPEGFKCDCVSCGMNKKHKEQQRLENRHSKICQKIEKEPNFPKDEIIDMYLCNDNGYFPVNDGPQIFWEKPNIEMLIDFLNFHQHWNPSYIRRMMFPMMSTIFLRDMATTTEKSLLFGQYEFDSLKRVKIRYGHEFYVVKWKRAVGNIALKIQSNEAGTQQDVREHDEMVDLLDDCDVPEIHEDDGCSFLLTDENMDLVGAAFPEEVKRFWQEQELKDMKKRKNSTPRSQENEKSASPNSRSIQLNITEFYQSTKIKHNKSKQGEESSKNVDDGQGSGGSKMKRKSSSSNLSKSVRRRLLFD 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi73g00083 638 Gene3D - 226 287 - -
Sebi73g00083 638 MobiDBLite consensus disorder prediction 554 638 - -
Sebi73g00083 638 SUPERFAMILY PIN domain-like 6 241 IPR029060 -
Sebi73g00083 638 FunFam Flap endonuclease GEN-like 1 226 284 - -
Sebi73g00083 638 SMART xpgineu 156 226 IPR006086 GO:0004518
Sebi73g00083 638 MobiDBLite consensus disorder prediction 606 631 - -
Sebi73g00083 638 SMART xpgn3 1 124 IPR006085 GO:0004518
Sebi73g00083 638 MobiDBLite consensus disorder prediction 591 605 - -
Sebi73g00083 638 Pfam XPG I-region 159 241 IPR006086 GO:0004518
Sebi73g00083 638 Pfam XPG N-terminal domain 1 117 IPR006085 GO:0004518
Sebi73g00083 638 Gene3D - 1 67 - -
Sebi73g00083 638 PANTHER FLAP ENDONUCLEASE FAMILY MEMBER 1 576 IPR006084 -
Sebi73g00083 638 CDD PIN_GEN1 2 230 - -
Sebi73g00083 638 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 231 246 IPR006084 -
Sebi73g00083 638 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 98 117 IPR006084 -
Sebi73g00083 638 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 176 196 IPR006084 -
Sebi73g00083 638 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 155 172 IPR006084 -
Sebi73g00083 638 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 25 39 IPR006084 -
Sebi73g00083 638 MobiDBLite consensus disorder prediction 566 590 - -
Sebi73g00083 638 SUPERFAMILY 5' to 3' exonuclease, C-terminal subdomain 226 442 IPR036279 -
Sebi73g00083 638 Gene3D - 77 225 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi73g00083 88 273 Core DNA Replication Machinery Family AT5G26680 30.612 6.23e-16 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi73g00083 K15338 - gmx:100791251 939.102