Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sebi73g00078 | ATGGCAGAATCATATAGTTCTTGTGCTATCAAGAATGTGTCTCCCAATTCTAAATCTAACAAAGTGAGCAGCATGAAAAGGTTCATTGGGGTGAGGCAAAGGCCTTCAGGAAGGTGGGTAGCAGAGATCAAAGACTCTTCTCAACATGTGAGGTTATGGCTTGGAACCTATGACACACCAGAAGAGGCTGCAAGAGCTTATGATGAAGCAGCTAGAGCTCTACGTGGGGAAAATGCAAGAACCAACTTTGCATCATCATTGAACCAAACCACAATTACTAATTCACTTTCCAATGAAGCAAAACATGGGTTGAGTTTTGCTTCCTTGAAAGCCAAGTTAAGCAAGAATCTTCAGAGCATCATGGCCAAGACTAGTAGTGATTGCAAGTCATCAAAGAGTAGAGTGAGTGACCATTTTACCTTTGCTACCATATTCCACCATAGGAGTACTTATCACCACCAAATCCCTTCAGTAGATGTTGAGAATTTGGTGCAGCCTAGCATTGTTGTGCCCCCTGTTGAACCTGACCCTGCTTCTTGGGAAACTAATTCTAGTGTTTCTGAGTGTTGTAGTTCTACTTCTGAGTGGATTGGGTTCAAGCAACCTGTAGGAGGAAGGGATTTAAGGGTTGGTGATGAAGGGTCTTTAGACCAATTGATGGGGTGGGTAGATAGCTCAGATAATGGAGGAAGTGAGGGATCAAGGAGCAAGAGGTTCAAGGTCTCTCCTTCTGTGCTTGTGCCTCCAACTTTCACTGATTGTGGTTCTCCATTTAGTTGTGGCTCTCCTTATCATGGTTATGGATCCCCTTATAGTGGTTGTGAATCTCCATATAATGGTTATGGCACTCAATTTAATAGTAGTGGAAATTAA | 873 | 0.4284 | MAESYSSCAIKNVSPNSKSNKVSSMKRFIGVRQRPSGRWVAEIKDSSQHVRLWLGTYDTPEEAARAYDEAARALRGENARTNFASSLNQTTITNSLSNEAKHGLSFASLKAKLSKNLQSIMAKTSSDCKSSKSRVSDHFTFATIFHHRSTYHHQIPSVDVENLVQPSIVVPPVEPDPASWETNSSVSECCSSTSEWIGFKQPVGGRDLRVGDEGSLDQLMGWVDSSDNGGSEGSRSKRFKVSPSVLVPPTFTDCGSPFSCGSPYHGYGSPYSGCESPYNGYGTQFNSSGN | 290 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sebi73g00078 | 290 | FunFam | ethylene-responsive transcription factor RAP2-11 | 26 | 85 | - | - | |
Sebi73g00078 | 290 | SMART | rav1_2 | 27 | 90 | IPR001471 | GO:0003700|GO:0006355 | |
Sebi73g00078 | 290 | Gene3D | AP2/ERF domain | 26 | 85 | IPR036955 | GO:0003700|GO:0006355 | |
Sebi73g00078 | 290 | SUPERFAMILY | DNA-binding domain | 27 | 85 | IPR016177 | GO:0003677 | |
Sebi73g00078 | 290 | PRINTS | Ethylene responsive element binding protein signature | 50 | 66 | IPR001471 | GO:0003700|GO:0006355 | |
Sebi73g00078 | 290 | PRINTS | Ethylene responsive element binding protein signature | 28 | 39 | IPR001471 | GO:0003700|GO:0006355 | |
Sebi73g00078 | 290 | CDD | AP2 | 26 | 86 | IPR001471 | GO:0003700|GO:0006355 | |
Sebi73g00078 | 290 | Pfam | AP2 domain | 27 | 76 | IPR001471 | GO:0003700|GO:0006355 | |
Sebi73g00078 | 290 | ProSiteProfiles | AP2/ERF domain profile. | 27 | 84 | IPR001471 | GO:0003700|GO:0006355 | |
Sebi73g00078 | 290 | PANTHER | SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR | 23 | 139 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sebi73g00078 | Sebi-Chr73 | 1590499 | 1591371 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sebi73g00078 | 17 | 85 | AP2-EREBP Transcription Factor Family | AT5G19790 | 68.116 | 2.05e-26 | 102 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-ERF | Sebi73g00078 | AP2 | 8.4e-16 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sebi73g00078 | K09286 | - | qsa:O6P43_017554 | 318.546 |