Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi73g00077 ATGGTGGAAGATGGTGGAGATGAGGTTGCAGTTGATGCACTTTCCACAGAAGAGTGGTTGTTACATGCAAAGGAACTTGTTCCTATTGCTCTTGATAAGGCAAAAGAGGTTAAGGGGTTTCCTGGTAGATGGAAGATGATCATTTCCAAATTAGAACAGATCCCATCTTGTTTATCAGACTTGTCAAGCCATCCATGCTTCTCAAAGAATGCTCTTTGCAAGGAGCAATTGCAGGCTGTGTCAAAGACACTCAAAGAAGCAATTGAATTAGCTGAGTTGTGTGTGAAGGAAAAGTATGAGGGTAAGCTTCAGATGCAGAGTGATCTTGATGCATTAACTGGGAAACTTGATTTGAATTTAAGGGATTGTGGGCTTTTGATCAAGACTGGTGTTCTTGGTGAGGCTACTTTGCCATTAGCCATGGCTATGTCTTGTTCTGTGGCAGAATCAGATGCTGTAACACACAACAACATAAGGGAATTACTGGCGCGCCTTCAGATCGGTCACTTGGAATCAAAGCACAAAGCTTTAGACAGCCTTGTTGAAGTTATGAAAGAAGATGAAAAAAATGTTTTAGCTGTTCTTGGTAGAAGCAACATTGCTGCTTTGGTTCAATTGCTTACAGCAACATCTCCAAGGATAAGAGAGAAGACAGTTACTGTTATATGCTCACTTGTAGAATCAGGAAGCTGTGAGAATTGGCTTGTTTCTGAAGGAGTTCTACCACCTCTCATAAGGCTTGTTGAGTCAGGTAGTGCTGTAGGTAAAGAGAAGGCCACAATATCCCTTCAGAGGCTGTCAATGTCAGCAGAAACAGCACGCGCGATTGTTGGACATGGTGGGGTTCATCCACTGGTTGATCTTTGTCAAACTGGTGATTCTGTTTCACAGGCTGCAGCAGCTTGTACTCTGAAGAATATATCAGCTGTTCCTGAAGTGAGACAGGTTTTGGCTGAAGAAGGGGTAGTGAGGGTTATGATCAATCTTCTTAACTGTGGAATGTTGTTAGGTTCCAAAGAGTATGCAGCAGAATGTTTGCAGAATCTCACTGCAAGCAATGAGAATCTAAGGAGAGGTGTTATATCAGAAGGTGGTGTTAGGAGTCTTTTGGCTTATCTTGATGGTCCACTTCCTCAAGAATCTGCTGTTGGGGCATTGAGGAATTTGGTTGGATCAGTTTCTCAGGAAACTTTGGTTTCATTGGGTTTGCTTCCCCGTTTGGTTCATGTGCTAAAGTTTGGATCTTTAGGTGCACAACAAGCTGCTGCATCTGCAATCTGCAGGGTTTGCAACACATCAGAGATGAAGAAAATGGTTGGTGAAGCTGGGTGTATCCCTCTCCTTGTGAAGATGCTTGAGGCTAAATCAAACAGTGCTAGAGAGGTTGCTGCACAAGCAATTGCAAGCTTGATTGTTCTGTCTCAGAATTGCAGAGAAGTTAAGAAGGATGATAAGAGTGTGCCAAATTTGGTTCAGTTGCTTGATCCAAGTCCACAGAACACTGCAAAAAAATATGCAGTTTCATGCCTTGGATCACTTTCTTCAAGTAAGAAATGTAAGAAACTTATGATCTCATATGGAGCAATTGGGTATCTGAAAAAACTTACTGAGATGGACATTCCAGGGGCTAAGAAGTTACATGAAAGATCGGAGAGAGGGAAATTAAGAAGTTTATTTAGCAAGAAATAG 1689 0.4204 MVEDGGDEVAVDALSTEEWLLHAKELVPIALDKAKEVKGFPGRWKMIISKLEQIPSCLSDLSSHPCFSKNALCKEQLQAVSKTLKEAIELAELCVKEKYEGKLQMQSDLDALTGKLDLNLRDCGLLIKTGVLGEATLPLAMAMSCSVAESDAVTHNNIRELLARLQIGHLESKHKALDSLVEVMKEDEKNVLAVLGRSNIAALVQLLTATSPRIREKTVTVICSLVESGSCENWLVSEGVLPPLIRLVESGSAVGKEKATISLQRLSMSAETARAIVGHGGVHPLVDLCQTGDSVSQAAAACTLKNISAVPEVRQVLAEEGVVRVMINLLNCGMLLGSKEYAAECLQNLTASNENLRRGVISEGGVRSLLAYLDGPLPQESAVGALRNLVGSVSQETLVSLGLLPRLVHVLKFGSLGAQQAAASAICRVCNTSEMKKMVGEAGCIPLLVKMLEAKSNSAREVAAQAIASLIVLSQNCREVKKDDKSVPNLVQLLDPSPQNTAKKYAVSCLGSLSSSKKCKKLMISYGAIGYLKKLTEMDIPGAKKLHERSERGKLRSLFSKK 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi73g00077 562 Gene3D - 154 336 IPR011989 -
Sebi73g00077 562 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 14 560 - -
Sebi73g00077 562 Pfam Armadillo/beta-catenin-like repeat 433 470 IPR000225 GO:0005515
Sebi73g00077 562 Pfam Armadillo/beta-catenin-like repeat 273 309 IPR000225 GO:0005515
Sebi73g00077 562 SMART arm_5 432 472 IPR000225 GO:0005515
Sebi73g00077 562 SMART arm_5 473 515 IPR000225 GO:0005515
Sebi73g00077 562 SMART arm_5 310 351 IPR000225 GO:0005515
Sebi73g00077 562 SMART arm_5 352 391 IPR000225 GO:0005515
Sebi73g00077 562 SMART arm_5 392 431 IPR000225 GO:0005515
Sebi73g00077 562 SMART arm_5 187 227 IPR000225 GO:0005515
Sebi73g00077 562 SMART arm_5 269 309 IPR000225 GO:0005515
Sebi73g00077 562 SUPERFAMILY ARM repeat 158 539 IPR016024 -
Sebi73g00077 562 Gene3D - 337 545 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi73g00077 Sebi-Chr73 1566669 1568357 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi73g00077 208 470 U-box Gene Family AT3G54790 29.478 6.51e-20 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi73g00077 - - gmx:100781453 934.48