Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi73g00069 ATGCCAGAGAATTTTGAGCAAAATGGTTTGAGAAGGAACAGAGAAGAAGAGCATGAAAGCAGATCTGGTAGTGATAATATGGATGGTGCTTCTGGTGATGATTTTGATGCTGCCGACAATCCACCAAGAAAAAAGCGTTATCACCGACACACTCCTCAGCAAATACAAGAACTTGAAGCGCTGTTCAAGGAGTGTCCTCACCCAGATGAGAAGCAAAGGCTTGAACTGAGTAAAAGGCTATGCTTGGAAACAAGGCAGGTGAAGTTTTGGTTCCAAAATAGAAGAACACAAATGAAGACTCAATTGGAACGCCATGAGAACACACTGCTTAGGCAAGAGAATGATAAACTCAGAGCTGAGAACATGTCTATGAGGGAAGCTATAAGGAATCCCATGTGTTCAAATTGTGGAGGTCCAGCTATAATTGGTGAAATTTCACTTGAAGAACAACATCTTAGGATTGAGAACGCTAGATTGAAAGATGAACTAGACAGAGTTTGTGCACTTGCTGGGAAATTTTTGGGTCGCCCCATTCCTTCATTAACAAGCTCAATTGGCCCTCCATTGCCAAATTCAAGTTTAGAGCTTGGAGTTGGGAGCAATGGTTTTGGTGGATTGAACACTAGTGTCCCTTCAACATTGCCTTTGGGTCCTGATTTTGGGATATCAAGTCCTTTAGGCATGGTGTCACCACCACCTCAAACAAGACCAACAACAACTGGCTTTGACAGATCAGTGGAAAGATCAATGTTTCTAGAGCTAGCTTTATCTGCAATGGATGAGTTAGTTAAGATGGCTCAAACTGGGGAGCCTCTTTGGATCAGAAGTTTAGAAGGGGGAAGAGAAATTCTCAACCAAGAGGAATACACAAGGACAATGACTCCTTGCATTGGTTTGAGACCAAATGGTTTTGTCTCAGAGGCTTCTAGAGAAACTGGTATGGTCATTATTAACAGCTTGGCCCTTGTTGAGACTTTAATGGACTCAAATCGATGGTCAGAAATGTTCCCTTGTATGATTGCAAGAACCTCCACCACTGAAGTCATATCTAATGGAATAAATGGAACCAGAAATGGTGCCCTTCATCTTATGCATGCTGAACTTCAAGTACTTTCTCCCTTGGTTCCTGTTCGTGAGGTCAATTTTCTACGGTTTTGTAAGCAGCACGCAGAAGGGGTATGGGCAGTGGTAGATGTGTCAATAGATACCATCCGAGAAACTTCTGGTGCACCGACTTTTGTGAACTGTAGGAGACTTCCTTCTGGTTGTCTGGTGCAAGATATGCCAAATGGTTACTCTAAGGTGACATGGGTGGAGCATGCAGAATATGATGAAAGCCAAGTCCACCAGCTCTATAGACCCTTGTTGAGCTCAGGCATGGGGTTTGGTGCACAACGTTGGGTTGCTATACTTCAACGCCAATGCGAATGCCTAGCCATCCTAATGTCCTCAGCACTTCCCTCTAGAGAACACTCAGCAATAAGTGCGGGTGGAAGGCGAAGCATGCTGAAGCTGGCACAGCGAATGACGAACAACTTCTGTGCAGGAGTGTGTGCATCAACGGTTCACAAATGGAACAAACTGAACAACAACAGCGTCGGAGAAGACGTGAGAGTGATGACAAGGAAGAGCGTGGACGATCCAGGTGAACCTCCAGGGATCGTTCTCAGTGCAGCAACCTCCGTTTGGCTCCCCGTTTCTCCACACAGACTCTTCGATTTCCTCCGCGATGAGAGGCTCCGAAGCGAGTGGGACATACTCTCCAATGGTGGACCAATGCAAGAGATGGCTCACATTGCCAAAGGACAAGACCATGCCAACTGTGTCTCCCTCCTTAGAGCCAGTGAGACATGCACAGACGCGTTGGGGTCGCTTGTGGTGTACGCGCCGGTGGATATTCCAGCCATGCACGTTGTTATGAACGGTGGTGACTCGGCTTACGTGGCGCTTCTGCCATCGGGGTTCTCTATTGTTCCTGATGGATCCGGGAGTGGCAATGGTGATAATAACGGCGGCGCGTCGCAGCAGAGAGCGAGTGGGTCCCTTCTGACGGTGGCTTTTCAGATACTTGTGAATAGTCTCCCCACGGCGAAGCTCACGGTGGAGTCAGTGGAGACGGTGAACAACCTAATCTCGTGCACTGTCCAGAAGATAAAAGCAGCACTTCGCTGTGACAGCTGA 2181 0.4709 MPENFEQNGLRRNREEEHESRSGSDNMDGASGDDFDAADNPPRKKRYHRHTPQQIQELEALFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENTLLRQENDKLRAENMSMREAIRNPMCSNCGGPAIIGEISLEEQHLRIENARLKDELDRVCALAGKFLGRPIPSLTSSIGPPLPNSSLELGVGSNGFGGLNTSVPSTLPLGPDFGISSPLGMVSPPPQTRPTTTGFDRSVERSMFLELALSAMDELVKMAQTGEPLWIRSLEGGREILNQEEYTRTMTPCIGLRPNGFVSEASRETGMVIINSLALVETLMDSNRWSEMFPCMIARTSTTEVISNGINGTRNGALHLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPTFVNCRRLPSGCLVQDMPNGYSKVTWVEHAEYDESQVHQLYRPLLSSGMGFGAQRWVAILQRQCECLAILMSSALPSREHSAISAGGRRSMLKLAQRMTNNFCAGVCASTVHKWNKLNNNSVGEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPHRLFDFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHANCVSLLRASETCTDALGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFSIVPDGSGSGNGDNNGGASQQRASGSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALRCDS 726
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Sebi73g00069 726 ProSiteProfiles 'Homeobox' domain profile. 41 101 IPR001356 GO:0003677
Sebi73g00069 726 Pfam START domain 253 477 IPR002913 GO:0008289
Sebi73g00069 726 Pfam Homeodomain 44 99 IPR001356 GO:0003677
Sebi73g00069 726 ProSiteProfiles START domain profile. 244 480 IPR002913 GO:0008289
Sebi73g00069 726 Gene3D - 315 473 IPR023393 -
Sebi73g00069 726 SUPERFAMILY Homeodomain-like 27 101 IPR009057 -
Sebi73g00069 726 Coils Coil 95 127 - -
Sebi73g00069 726 MobiDBLite consensus disorder prediction 1 51 - -
Sebi73g00069 726 CDD homeodomain 43 101 IPR001356 GO:0003677
Sebi73g00069 726 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 40 722 IPR042160 -
Sebi73g00069 726 SUPERFAMILY Bet v1-like 246 477 - -
Sebi73g00069 726 ProSitePatterns 'Homeobox' domain signature. 76 99 IPR017970 GO:0000981|GO:0006355
Sebi73g00069 726 SMART HOX_1 42 105 IPR001356 GO:0003677
Sebi73g00069 726 SUPERFAMILY Bet v1-like 505 719 - -
Sebi73g00069 726 SMART START_1 253 477 IPR002913 GO:0008289
Sebi73g00069 726 FunFam Homeobox-leucine zipper protein GLABRA 2 253 476 - -
Sebi73g00069 726 Gene3D - 31 117 - -
Sebi73g00069 726 MobiDBLite consensus disorder prediction 8 24 - -
Sebi73g00069 726 FunFam Homeobox-leucine zipper protein HDG1 31 117 - -
Sebi73g00069 726 CDD START_ArGLABRA2_like 248 476 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Sebi73g00069 Sebi-Chr73 1385342 1391128 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi73g00069 3 726 Homeobox Transcription Factor Family AT3G61150 67.196 0.0 989
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Sebi73g00069 START 3.8e-57 CL0209
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi73g00069 K09338 - gmx:100783614 1278.85