Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi73g00051 ATGGAACAAGTTAAAGAAGAAAGTGATGCTGGTATCAAAGGGGAAACCTTGGTTTCAAGTTTTGCAGAGCCTGAAAGCAGTTGCGCTAAGCCCCAAGCAGGGGTCAGGATTGTCCCTGGTAACAGGAGATATACCAGGGGATACTTGTGGAGGATGACTGGTCCAACAAGACGATCAACCAAAGGAGGGTGGACAGAGCAGGAGGATAAATGGCTGATTGCTGCTGTGAAAACCTATAATGGAAAAAATTGGAAAAAGATAGCTGAATATGTTCCAACTAGAACAGATGTTCAATGCCTGCACCGTTGGCAGAAGGTTCTCAATCCTGATCTTATTAAAGGACCTTGGACAAAACAGGTGCAAATTAAAGTATATATTCACTTAATGGCCATTAAGGGAAGGGAAGATGATCTAATACGTGAGCTTGTTATGATAAAAGGGAAAAAGAGCTGGTCTGAGATTTCAAAGTTCTTGCCTGGTCGCATAGGCAAGCAATGTAGAGAAAGGTGGCACAACCATTTAAATCCAGATATAAAAAGAACTGCATGGACCAAAGAAGAGGAGTTGATTCTTGTCAAGGCTCACCAAATGTATGGGAATAGATGGGCTGAAATAGCCAAGTTTCTGCATGGAAGGAGTGAAAACTCTATCAAGAATCATTGGAACTGCTCTATGAAGAAAAAGGTCAATTTAGATGCTTCTCTGCGTCTTCCTCAGTACAACTTAAATCTTAATTTTGAGGAAGGTAAAATGTCTATTGTCAAACAAAGTTCTGAGGAGAAAGAGAAAGTGAACCTGGACCAAAGATCAAAGTCCAATTTGGGTATTGGAATTATATATGCAAGAGAAAACCATGCACAATCAATGAATTCTGAAACTAGTATACATGTCAGAAATGAAGCTGGTTGTTTCACAAAACCACAATCTACATCTGCCCTGAATCAAACAAGCAATGAATCATGTAAAGCTGCTTCCCCAGTGAGATTTGAGGCTAATGTCAATAGGGGAAGTATTGAACCTCTTCAAAACAAGGACAACACATGTGTTAGTTCATTGTGCTACAAGCCCCTTCAGCTTAAGGATTTGGACATTCTTTTGGGAACTGGTAGAAAACCAAGCACTGACAATTATCTACAGAAGAATTCAAATCCTAATGCCCTTTATATTACCCCACCAAACTATACCAAAAGAATGTTTGATGATTCTCCAAGTCCAGCAGATATATTGAGGTCTGCTGCAAGGAGTTTTAAGGACACCCCATCTATCATAAGAAAAGAAAGGACTAAGTTGTCCAAGAAAAATACAAGTAGCATTCAATTTTCAAAAGGGGATGTCAGGTTTAATTGCACCACGAGCCCTCGGAGACTGGATTTTTCTCCATGTGAAAAAAGTTGA 1395 0.3978 MEQVKEESDAGIKGETLVSSFAEPESSCAKPQAGVRIVPGNRRYTRGYLWRMTGPTRRSTKGGWTEQEDKWLIAAVKTYNGKNWKKIAEYVPTRTDVQCLHRWQKVLNPDLIKGPWTKQVQIKVYIHLMAIKGREDDLIRELVMIKGKKSWSEISKFLPGRIGKQCRERWHNHLNPDIKRTAWTKEEELILVKAHQMYGNRWAEIAKFLHGRSENSIKNHWNCSMKKKVNLDASLRLPQYNLNLNFEEGKMSIVKQSSEEKEKVNLDQRSKSNLGIGIIYARENHAQSMNSETSIHVRNEAGCFTKPQSTSALNQTSNESCKAASPVRFEANVNRGSIEPLQNKDNTCVSSLCYKPLQLKDLDILLGTGRKPSTDNYLQKNSNPNALYITPPNYTKRMFDDSPSPADILRSAARSFKDTPSIIRKERTKLSKKNTSSIQFSKGDVRFNCTTSPRRLDFSPCEKS 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi73g00051 464 SUPERFAMILY Homeodomain-like 154 231 IPR009057 -
Sebi73g00051 464 PANTHER MYB PROTEIN-RELATED 61 119 - -
Sebi73g00051 464 Gene3D - 181 272 - -
Sebi73g00051 464 CDD SANT 135 174 IPR001005 -
Sebi73g00051 464 FunFam Transcriptional activator Myb isoform A 60 112 - -
Sebi73g00051 464 SUPERFAMILY Homeodomain-like 59 119 IPR009057 -
Sebi73g00051 464 SMART sant 179 227 IPR001005 -
Sebi73g00051 464 SMART sant 60 109 IPR001005 -
Sebi73g00051 464 SMART sant 127 176 IPR001005 -
Sebi73g00051 464 Pfam Myb-like DNA-binding domain 180 222 IPR001005 -
Sebi73g00051 464 Pfam Myb-like DNA-binding domain 135 174 IPR001005 -
Sebi73g00051 464 Pfam Myb-like DNA-binding domain 61 107 IPR001005 -
Sebi73g00051 464 CDD SANT 182 222 IPR001005 -
Sebi73g00051 464 CDD SANT 64 107 IPR001005 -
Sebi73g00051 464 FunFam Transcriptional activator Myb isoform A 113 179 - -
Sebi73g00051 464 ProSiteProfiles Myb-like domain profile. 135 174 IPR001005 -
Sebi73g00051 464 ProSiteProfiles Myb-like domain profile. 175 225 IPR001005 -
Sebi73g00051 464 Gene3D - 60 110 - -
Sebi73g00051 464 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 56 111 IPR017930 -
Sebi73g00051 464 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 175 229 IPR017930 -
Sebi73g00051 464 Gene3D - 111 180 - -
Sebi73g00051 464 ProSiteProfiles Myb-like domain profile. 56 107 IPR001005 -
Sebi73g00051 464 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 135 174 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi73g00051 Sebi-Chr73 989158 993404 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi73g00051 133 233 MYB Transcription Factor Family AT5G11510 32.353 2.48e-13 70.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sebi73g00051 Myb_DNA-binding 1.8e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi73g00051 - - qsa:O6P43_017574 431.024