Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi73g00040 ATGCTCCACAAAACGGTAATATTGAACGAGAAACTGAGGCATTTACTTGGGGAAGATCTTGGACCTTTGAACATAAAAGAGCTGCAAAATCTTGAGAAACAACTTGAAGGAGCTTTAGCACAAGCTAGGCAGAGGAAGACACAAATTATGATTGAACAAATGGAAGAGCTTCGTAGAAAGGAACGCCACCTTGGAGACATGAATAAGCAACTTAGACACAAGCTTGAAGTCGATGGATTTAATCTGAAAGCTATTGAAAGCTTGTGGAGCTCAACTTCTTCTGCTGGTGGAGATGGCAGCTTTCCCTTGCAGCCTCCTCCTGAAACCAACCACATGGACTGCCAACCTGAACCTTTCTTGCAAATAGGGTACCATCACTACGTTCAAGCTGAGCCATCCAATGTTCCAAAGAGCATAGCTGGTGAGACTAGCTTTATGCAGGGATGGGTCCTTTGA 456 0.4408 MLHKTVILNEKLRHLLGEDLGPLNIKELQNLEKQLEGALAQARQRKTQIMIEQMEELRRKERHLGDMNKQLRHKLEVDGFNLKAIESLWSSTSSAGGDGSFPLQPPPETNHMDCQPEPFLQIGYHHYVQAEPSNVPKSIAGETSFMQGWVL 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi73g00040 151 ProSiteProfiles K-box domain profile. 1 81 IPR002487 GO:0003700|GO:0005634|GO:0006355
Sebi73g00040 151 Pfam K-box region 7 76 IPR002487 GO:0003700|GO:0005634|GO:0006355
Sebi73g00040 151 Coils Coil 54 74 - -
Sebi73g00040 151 Coils Coil 25 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi73g00040 Sebi-Chr73 809493 811719 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi73g00040 13 151 MADS-box Gene Family AT2G45650 56.849 5.57e-52 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi73g00040 K09264 - gmx:100820061 223.402