Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi736g00004 ATGGGTTCTCAAGGTAATGGGCAACAGTCTCATTTACAACATTCTCCATTGTCTAGGCAAAGCTCTTGGTATAATCTCACCCTTGATGAGGTTAAGAGTCAATTAGGAGACATGGGGAAGCCATTAGGGAGCATGAACCTTGATGAGCTTCTTCAGAATGTGTGGACTGCTGAAGCAAATAAGCCTGTGCTAGGCATGGACAATGATGAGAACATGTCATCCTCTTCTTCCCTTCAACGCCAGGCTAGTCTCACATTGGCCCGTGCTTTGAGTGGGAAGACAGTTGATGATGTGTGGAGAGAGATTCAACAAGGTCAGAAGAAAAGGTATGGAGAGGGTGTGAAGAGCCATCAGGATAGAGAAATGAGTCTTGGTGAAACAACCTTAGAGGATTTCTTGGTGCAAGCAGGGCTTTTTGCTGAAGCTTCTATCAGTCCAGCTGTGGGGTATGATACAATGGAGTCCCCCACTCCTCAGAGTTTTCAACACAAAACAGGATTGACATCCTCCCCTTCAATTGGCAGCTTGTCGGACACAAGACCGGGCCGGAAAAGGGACTGTCCTGATGCATATGAGAAAACTCTGGAGAGGAGGCTGAAGAGGAAAATCAAGAATAGGGAATCAGCTGCTCGATCACGGGCCCGAAAACAGGCTTACCATAATGAACTGGTTGGCAAGGTTTCGCGTCTAGAAGAAGAAAATATAAAGCTCAAGAAAGAGAAGAAATTCTATTGA 735 0.4585 MGSQGNGQQSHLQHSPLSRQSSWYNLTLDEVKSQLGDMGKPLGSMNLDELLQNVWTAEANKPVLGMDNDENMSSSSSLQRQASLTLARALSGKTVDDVWREIQQGQKKRYGEGVKSHQDREMSLGETTLEDFLVQAGLFAEASISPAVGYDTMESPTPQSFQHKTGLTSSPSIGSLSDTRPGRKRDCPDAYEKTLERRLKRKIKNRESAARSRARKQAYHNELVGKVSRLEEENIKLKKEKKFY 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi736g00004 244 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 200 215 IPR004827 GO:0003700|GO:0006355
Sebi736g00004 244 Coils Coil 220 244 - -
Sebi736g00004 244 Gene3D - 195 243 - -
Sebi736g00004 244 SUPERFAMILY Leucine zipper domain 197 242 IPR046347 GO:0003700|GO:0006355
Sebi736g00004 244 MobiDBLite consensus disorder prediction 153 218 - -
Sebi736g00004 244 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 17 240 IPR043452 GO:0003700|GO:0045893
Sebi736g00004 244 MobiDBLite consensus disorder prediction 179 203 - -
Sebi736g00004 244 CDD bZIP_plant_BZIP46 197 242 - -
Sebi736g00004 244 Pfam bZIP transcription factor 197 240 IPR004827 GO:0003700|GO:0006355
Sebi736g00004 244 MobiDBLite consensus disorder prediction 153 177 - -
Sebi736g00004 244 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 195 244 - -
Sebi736g00004 244 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 195 240 IPR004827 GO:0003700|GO:0006355
Sebi736g00004 244 SMART brlzneu 193 242 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi736g00004 Sebi-Chr736 52326 53257 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi736g00004 17 243 bZIP Transcription Factor Family AT3G56850 46.183 7.06e-60 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sebi736g00004 bZIP_1 1.9e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi736g00004 K14432 - gmx:100798549 374.4