Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi735g00013 ATGGATACATCAAATCCTGCTGTCTTTGTCAATGCTGAGCTATTACACTTCTATGTTGGAAGAAGGGTTCGGGCAGTGATGCAGGTTATGCGATCGGACGGTGTAACTGTTATTGGAAAATCCACGGATGAGAAGCAGCTAGTAGTAAAAGGATCTCCCCCACCTGCTCCTCTTTCAACTTTTGTAGAAGTTATTGGTATTGTTGACCGCGATAAGTCTATCCGTGCTGAGACATGGACCAATTTTGGTGATGCAATTGATATGGTCAGCTACCAAAAGCTTTGTCAGCTTGCAAATGGAGAATTTAAACACTTGTTCCTGTGA 324 0.429 MDTSNPAVFVNAELLHFYVGRRVRAVMQVMRSDGVTVIGKSTDEKQLVVKGSPPPAPLSTFVEVIGIVDRDKSIRAETWTNFGDAIDMVSYQKLCQLANGEFKHLFL 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi735g00013 107 SUPERFAMILY Nucleic acid-binding proteins 6 106 IPR012340 -
Sebi735g00013 107 CDD RPA3 6 106 - -
Sebi735g00013 107 Gene3D - 1 107 IPR012340 -
Sebi735g00013 107 Pfam Replication factor A protein 3 1 103 IPR013970 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Sebi735g00013 107 PANTHER REPLICATION PROTEIN A 14 KDA SUBUNIT A-RELATED 1 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi735g00013 Sebi-Chr735 114677 115153 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi735g00013 1 107 Core DNA Replication Machinery Family AT4G18590 64.486 7.07e-50 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi735g00013 K10740 - gmx:100306641 177.563