Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi734g00020 ATGCGTGGTGATACGTCAAAGTGCCACGTGTACTTAACGCCCATGCCTCGAAGCATCTGGACGTTCTTCCCGCGAACTTATTTACAGAAACCGAACAGCGATTCCGTTACCGTCACTGTTACCTCCGAAGACGATCGAACGCTCCGATTTCCGATTTCAAACTCTCTCCGGCACAAAAAAAATTCGGATCCGGGTATGAGGACCCGTTCAGCCACCACATGGGTCATCATCTTGGCCACGCTTTGTTTCCTCCAAAGCTTCCTGGAACTTGAAGCCAGAACCATAGACCCCTACAAGGTTCTTGGGGTTGATAAAAATGCAAGTCAGCGGGAAATTCAGAAGGCTTTCCACAAGCTCTCTCTCCAGTATCACCCTGACAAGAACAAAGCCAAGAGTGCACAAGAGAAGTTTGCTCAGATCAATAATGCATACGAGATTTTATCTGATGAACAGAAGAGGAAGAATTATGACTTGTATGGAGATGAGAAAGGAAATCCTGGATTTGAAGCTGGCCATCCTGGAGGTCAGGGTGGACATACTTTTTTCACTGGTGGTGGTCCTGGACAAAGCGGTTTTAACTTCAGACCAGGGGACTGGCAGGGTATGGGTGGGCAGGGAGGCTCTAAGTCATTTTCCTTTTCCTTTGGTGACTCAAATTCTTTTGGATTTGGTTTGGATGATCTTCTTGGCAGTTTTTTTGGTGGTGGAGGAGGTGGTGGGAGACAGTTTGGTGGTTTTGGCAGTTCAACTAATTCTCAATCTGGGTCCAAGAGTTACCCCAAAAGTTTTAAAGCCATAAATTCACAAATCTACAAGAAAGAAATAGCTGATGAAGGGATGACCTGGCTTTTGTTATCTTATACACCCTCATTGAAAGGGATCCAATACTTTGAATCCACTGTAGAGGAGGTTGCCAGTACATTGCAAGGAGCATTGAAG 939 0.4569 MRGDTSKCHVYLTPMPRSIWTFFPRTYLQKPNSDSVTVTVTSEDDRTLRFPISNSLRHKKNSDPGMRTRSATTWVIILATLCFLQSFLELEARTIDPYKVLGVDKNASQREIQKAFHKLSLQYHPDKNKAKSAQEKFAQINNAYEILSDEQKRKNYDLYGDEKGNPGFEAGHPGGQGGHTFFTGGGPGQSGFNFRPGDWQGMGGQGGSKSFSFSFGDSNSFGFGLDDLLGSFFGGGGGGGRQFGGFGSSTNSQSGSKSYPKSFKAINSQIYKKEIADEGMTWLLLSYTPSLKGIQYFESTVEEVASTLQGALK 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi734g00020 313 ProSiteProfiles dnaJ domain profile. 96 160 IPR001623 -
Sebi734g00020 313 PANTHER DNAJ PROTEIN ERDJ3A 68 313 - -
Sebi734g00020 313 SMART dnaj_3 95 152 IPR001623 -
Sebi734g00020 313 SUPERFAMILY Chaperone J-domain 83 161 IPR036869 -
Sebi734g00020 313 CDD DnaJ 96 149 IPR001623 -
Sebi734g00020 313 Coils Coil 130 150 - -
Sebi734g00020 313 ProSitePatterns Nt-dnaJ domain signature. 137 156 IPR018253 -
Sebi734g00020 313 Pfam DnaJ domain 96 157 IPR001623 -
Sebi734g00020 313 Gene3D DnaJ domain 94 246 IPR036869 -
Sebi734g00020 313 PRINTS DnaJ domain signature 98 116 IPR001623 -
Sebi734g00020 313 PRINTS DnaJ domain signature 152 171 IPR001623 -
Sebi734g00020 313 PRINTS DnaJ domain signature 116 131 IPR001623 -
Sebi734g00020 313 PRINTS DnaJ domain signature 132 152 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi734g00020 Sebi-Chr734 435853 437709 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi734g00020 98 157 C2H2 Transcription Factor Family AT1G74250 42.424 7.27e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi734g00020 - - gmx:100796871 291.582