Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi733g00022 ATGGACTGGGTTCGTGGACAATCTCTTGGTAGTGGAAGCTTCGCCACTGTCAATTTAGTTATACCCACAAACGGTTATACACCTCCCACAGCCGTCAAGTCCTCCAACGTTCACACCTCGTATTTGCTCAAGAACGAGGAACAAGTCCTCAATCGCATAGGATGTTGCCCGCAAATTATTAAGTGTTTTGGCCACGATCAAACCTTAGAAAACGGTGAAGAGTACTACAATCTGTTTCTCGAATACGCTTCTGGTGGCACTCTCGCTGATCAGCTCAAGAACCACGGTGGCCGGTTCCCGGAATCTCTCGTTCGCCGATACACAAGATCCATCGTTGAAGGTCTCAAGCACATTCATGTCAATGGTTTCGTCCACTGCGACGTGAAGCCCCAAAACATCCTCGTTTTCGACAATGGCGATGTGAAGATTGCGGACTTTGGGCTTGCGAAGGAAACAGGGGAGAAAGAGAAACAGAGTCAGAGGTGGGAGTTCAGGGGAACTCCTATGTTTATGTCGCCGGAATCGGTAAACGACAACGAATATGAATCACCGGCGGATATATGGGCTCTAGGCTGCGCCGTCGTGGAGATGGTGACCGGAAAACCGGCCTGGAACGTCCGCATCGGGTCGAATATATGGTCGTTGTTGATTCGAATTGGGGTGGGAGAAGAATTGCCGTTGATTCCAGATGAAATGTCAAAACAGGGGAAGGATTTTCTGGAGAAGTGTTTCGTGAAGGATCCAAAGAAGAGATGGAGCGCAGAGATGCTTTTGAAGCACGCCTTTCTTGCAGATGACACTGTTTCATTCAATGATTCATTGCCATCATCATCTCCAAGAACACACTTCGATTTCCCTCATTGGGCTTCCACTCTAACGGCTTCGCTTCCCTCTTCACCGGATTCTGACGAATGGCGTGAATTTGTGCCTTTGCCGGGAAACCGAATCCGGTGGCTGGACACGGATCAGGGACCAATGGATTGGTCAGAATCGGATAGCTGGACTAATGTTAGACTAGCTAGAGTAGGAGCTTCGATCGCCAAACACCTCTGCACAAGGAATTATATATCCATATGTAGAGCAGGATATATTCGAAGCGCCAGAAATCATTACCTGCAACCTTCGTTTCAAGAGCATTCATTTACTAAGTTATACAAGGGAGCCATAATTGAGAAGCATAATTTCCTTTCAACAACGGCTACTAACAACACTACTGAGGATGGGAGTGAAGAAAAAGAAATGATATCTGTAACTTTTATTGATAAGGATGGCGAGGAAAAGCTTATCAAAGTCCCTGTTGGAATGTCCATGTTAGAAGCTGCTCATGAAAATGACATTGAACTTGAAGGCAAGAGCTTTGATATTAACGTTATACTGATCCCTGAATGCACATTCTTCTGA 1401 0.4618 MDWVRGQSLGSGSFATVNLVIPTNGYTPPTAVKSSNVHTSYLLKNEEQVLNRIGCCPQIIKCFGHDQTLENGEEYYNLFLEYASGGTLADQLKNHGGRFPESLVRRYTRSIVEGLKHIHVNGFVHCDVKPQNILVFDNGDVKIADFGLAKETGEKEKQSQRWEFRGTPMFMSPESVNDNEYESPADIWALGCAVVEMVTGKPAWNVRIGSNIWSLLIRIGVGEELPLIPDEMSKQGKDFLEKCFVKDPKKRWSAEMLLKHAFLADDTVSFNDSLPSSSPRTHFDFPHWASTLTASLPSSPDSDEWREFVPLPGNRIRWLDTDQGPMDWSESDSWTNVRLARVGASIAKHLCTRNYISICRAGYIRSARNHYLQPSFQEHSFTKLYKGAIIEKHNFLSTTATNNTTEDGSEEKEMISVTFIDKDGEEKLIKVPVGMSMLEAAHENDIELEGKSFDINVILIPECTFF 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi733g00022 466 SUPERFAMILY Protein kinase-like (PK-like) 3 299 IPR011009 -
Sebi733g00022 466 Gene3D Phosphorylase Kinase; domain 1 1 89 - -
Sebi733g00022 466 SMART serkin_6 3 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi733g00022 466 ProSitePatterns Serine/Threonine protein kinases active-site signature. 123 135 IPR008271 GO:0004672|GO:0006468
Sebi733g00022 466 FunFam Mitogen-activated protein kinase kinase kinase 17 2 292 - -
Sebi733g00022 466 Gene3D Transferase(Phosphotransferase) domain 1 90 287 - -
Sebi733g00022 466 ProSiteProfiles Protein kinase domain profile. 3 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi733g00022 466 CDD STKc_MAPKKK 2 263 - -
Sebi733g00022 466 Gene3D - 397 453 IPR012675 -
Sebi733g00022 466 ProSitePatterns Protein kinases ATP-binding region signature. 9 33 IPR017441 GO:0005524
Sebi733g00022 466 Pfam Protein kinase domain 5 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi733g00022 466 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi733g00022 Sebi-Chr733 290225 294670 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi733g00022 1 338 MAP Kinase Kinase Kinase AT5G67080 49.719 9.66e-118 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Sebi733g00022 Pkinase 2.4e-56 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi733g00022 - - aprc:113869133 502.286