Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi733g00012 ATGGCTTGCCATTCCCTCAACATTGATATTGAAGAGATTCAAAGCCCCCAGTCCCACGTTTCTTCTGACCTTAACTCCACGAGTCCTCGTTCACCCACACCTTCGGAACATGAATGGGTTCCAAATTGTGTTGAAGAATTGAAGCCCAAGGTTGGGCAACAATTTGATACTTTAAAAGAAGGTGAAGAATTTTACAAAAGGTACGCACATAATGTTGGATTTAGTGTCCGTTGCTCATCGGAAACTAAAGATAAAAATGGTGTGAAGCGTTGGAAGTATTTTGTTTGCTCAAAAGAAGGTTACATACTAGATAAGGAAAAAGTTGGGGAACAAAGCAACTCAACTATTAAGTCTAGGAGAAGGAGTCTTACAAGAGAATGGTGCAATGCAAAGGCCGTTTTCAAATTGGTAGGGGAAGGTAAATATGAGCTCATTCGATTTCATGAAAGTCACACACATGTACTCGCTTCACCTATGAAGAGACAATTTCTAAGATCATCAAGAAAGAATGAGTTATGGATTGCATGTTTAGATTGTGGAGTTGAAAATAAGAAAGAGGAAGATGGAAAAGAAGTATTGCATGTAATTGATAACAGTCAGGCTAATGGTAAAATACGAGAAGTGGTTTATAATCCTTCTGATCACAATGCAAATTGTTCATGCAACATGTCCCAATCTCTTGGCATACCTTGTAGACACATACTTTGTATTCTAAAAGGGAATGGTTTAAATAAAATACCAAGCAATTACATTGTGAATAGGTGGACTAAGTTGGCAAATAGAAAACCTATTTTTGATATTGCTAATGATGTCTTGGAAAGGTGTTCTAAACCAGAAAATGAGAGAAAGCTCATTTCAGATGCATGGGATAACTTTTTAAGGTGCATGGACAAAGCTGGACAAAGTAAAGAAAAATTGCTTGTTGTGATAAATGGAACCATTGACATTGAAAAGGAATTGACTGAGTTTGAAGGGGATTCTCAACAAAGTAAGACAAATAATTTACAGGCCTTTATTGGATCCAATATTCCTAAAGAAGTGGACATTCTTCCACCACAATTTTCAAAGACAAAGGGAAGCGGAAAACGAATCAAAGGAGGCAAAGAGAAGGCAATTCAGCAACAACAGAAAAGAACCAGGCTTTGTAAAGCATGCGGCCAACATGCATTTCATGACAGTCGTAACTGTCCCCTAAAGTCATCTCCATAA 1209 0.3763 MACHSLNIDIEEIQSPQSHVSSDLNSTSPRSPTPSEHEWVPNCVEELKPKVGQQFDTLKEGEEFYKRYAHNVGFSVRCSSETKDKNGVKRWKYFVCSKEGYILDKEKVGEQSNSTIKSRRRSLTREWCNAKAVFKLVGEGKYELIRFHESHTHVLASPMKRQFLRSSRKNELWIACLDCGVENKKEEDGKEVLHVIDNSQANGKIREVVYNPSDHNANCSCNMSQSLGIPCRHILCILKGNGLNKIPSNYIVNRWTKLANRKPIFDIANDVLERCSKPENERKLISDAWDNFLRCMDKAGQSKEKLLVVINGTIDIEKELTEFEGDSQQSKTNNLQAFIGSNIPKEVDILPPQFSKTKGSGKRIKGGKEKAIQQQQKRTRLCKACGQHAFHDSRNCPLKSSP 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi733g00012 402 ProSiteProfiles Zinc finger SWIM-type profile. 206 242 IPR007527 GO:0008270
Sebi733g00012 402 Pfam SWIM zinc finger 217 235 IPR007527 GO:0008270
Sebi733g00012 402 MobiDBLite consensus disorder prediction 14 38 - -
Sebi733g00012 402 PANTHER OS01G0519700 PROTEIN 197 388 - -
Sebi733g00012 402 MobiDBLite consensus disorder prediction 14 35 - -
Sebi733g00012 402 Pfam FAR1 DNA-binding domain 63 155 IPR004330 -
Sebi733g00012 402 SMART 26again6 217 244 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi733g00012 Sebi-Chr733 169222 171590 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi733g00012 FAR1 1.1e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi733g00012 - - vvo:131614599 333.954