Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi733g00005 ATGAATCGGATCGAGATCCGATTCCCCATTTCCGAATCGGGTCCTGATAAGCTTCGTCAGCATTGCCACCGTCAATGGCGTCGAAGCCTCCGTCGTCGCCCTCTTCCTCTAGATCAGAGCCTCCCCTCGATCCCTCCGTATACCTTCTCTATCTCTTCATCGCATTCGATACCTTATCCTCCCTCCCAAACTCTGCTAAATTACTTGGTTGAAACTGGAGATGTAGCTGCATTCTATATCCTTCGCTTATCCGAGATGTGTGGTAGTATGACATTGTTAACTGCTTCAATGCAGACAAAGGAAGTGGAGGGTGCAAGTCCTACCATTAAAGATGTATTACTGGTTATTGATTCTTTAAAGAAACAAGTTGCTGCTGATCGGATTGTTTCAGTAAAGAAAAGAATGGAAGAAAATAGACAGAAGCTGGTTGGTTTCACAAACCATCTCTGCAAATTGTCGATGGAGAGAAGGACCTGCAGCATTACTGATACAGATAGAAGTTTGGACCTACTGACTAAGAGGCAAAAAGATGCAATTGATATGTACAATGGTGTTCATCCGAGTAATGGTGATAGGGAGAGCAATGGCTATCATGAACCAATTATTCTAACAACAACAGCTGCAAAGAATGCTGTTCATTCTATCAAGTTACCTGAAGTAAAAAGATTACCTCCTTACACTACATGGATTTTCCTGGACAGAAATCAGAGAATGACAGAGGATCAGTCAGTAGTAGGTCGGAGGCGAATTTATTATGATCAAAATGGCGGAGAAGCACTTATTTGCAGTGACAGTGAGGAGGAAATAATAGAGGAGGAAGAGGAAAAAAGAGAATACGTAGAATCAGAAGATTATATACTTCGCATGACTGTCAGAGAATTTGGTTTATCTGATACTGTCCTGGAGTCACTGTCTCAGTGTTTTTCTAGAAACACTAGTGACATTAAGGCAAGATACGAAACTCTTAGTAATGAAGACAATGCTGGTGGGGGTTCCAAGAATGGAGATACTGAAGAGAATTCTCAAAATGGCAATTCTTTTCTGGAAAAGGATCTTGAAGCAGCTCTTGACTCTTTTGACAACCTCTTTTGTCGACGATGTCTTGTTTTCGATTGCAGATTACATGGATGTTCTCAAGATCTTGTCTTCCCCGCTGAGAAGCAACCCTTGTGGAGCCCTCCTGATACTGAAAATTCTCCATGTGGGCCAAATTGTTTCCGATTGGTACTTAAATCGGAAAGATTTGCCAAAGGTACCTCTTCTACTCAGGCTGATGTTGAAGACAAATGCTCTGGTGGTGCTTTATCTAGGAAAAAGTCTTCCGCTAGAAGGCGGATAAAATGCAGCCAAAGTGAAAGCGCTTCTTCTAATGCAAAAAACATATCTGAGAGTAGTGACTCAGAGAATGGTCCTGGACGGGATGCTGTTTCAGCTTCCCATTCAGCACCTTCTAAAACTAAATCTGTGGGCAAAAGTGGAATTGGCAAAAGGAACAGTAAGCGAGTGGCGGAACGTGTTCTAGTTTGCATGCAGAAACGGCAGAAGAAAACAGTGGCTTCTGATTCCGATTCCATTAGTGAAGCTCTTGACCGTTCACTGAATGATACGGTTACTGACCCACATGTCATGAGTGGTGAAGACAAGAGGAAAGAAGAGTTTGTGGATGAGAATGTTTGTAAACAAGAAATCACAGATAATAAATCTTGGAAAGCTCTTGAAAAAGGGCTTTTAGAGAAAGGCATGGAGATTTTTGGTAGAAACAGCTGCTTAATAGCCAGGAATCTCTTAAATGGTCTAAAGACATGTTGGGATGTTTTCCAATACATAAATTGTGAAGATGGAAAGATATCTGGTCCTGCTGGGGATGCTGCAAATTCTCTTGTGGACGGATATTCCAAGGGTAATAATGAAGTGAGACGAAGGTCAAGATTTTTACGTAGAAGAGGTAGAGTTCGTCGTTTGAAGTATACCTGGAAATCTGCTGCTTATCATTCAATCAGGAAAAGGATTACAGAGAGAAAGGACCAGCCCTGCCGGCAGTATAATCCATGTGGTTGCCAGTCAGCTTGTGGAAAGCAGTGTCCTTGTCTTCAAAATGGAACCTGCTGTGAAAAGTACTGTGGATGCCCGAAGAGTTGCAAGAATCGATTTCGTGGCTGTCATTGTGCAAAGAGTCAATGCCGAAGTCGTCAATGTCCATGCTTTGCTGCAGATAGGGAATGTGATCCAGATGTTTGTAGGAATTGTTGGGTCAGTTGTGGCGATGGTACTCTTGGGATTCCTAATCAAAGAGGGGATAATTATGAATGTAGAAATATGAAGCTTCTTCTCAAACAGCAGCAAAGGGTTCTTCTTGGAAGGTCTGATGTATCTGGCTGGGGAGCCTTCCTAAAGAATAGTGTTGGTAAGCATGAATACCTTGGAGAGTATACCGGTGAGTTAATTTCTCATAGAGAAGCAGATAAGCGAGGAAAGATATATGACCGTGAAAATTCATCTTTTCTCTTTAATCTGAATGATCAGTTTGTTCTTGATGCTTACCGAAAGGGTGATAAATTGAAGTTTGCAAACCATTCTCCGGATCCAAATTGCTATGCAAAGGTTATTATGGTTGCTGGAGATCATAGGGTAGGCATTTTTGCCAAGGAACGGATTTGTGCTGGGGAGGAACTGTTTTATGATTATCGATACGAGCCTGATAGAGCTCCTGCCTGGGCTCGGAAGCCGGAGGCATCTGGATCAAAAAAAGAGGACGGTGCTCCTTCAAGTGGTCGTGCAAAGAAGCTAGCTTAA 2793 0.4239 MNRIEIRFPISESGPDKLRQHCHRQWRRSLRRRPLPLDQSLPSIPPYTFSISSSHSIPYPPSQTLLNYLVETGDVAAFYILRLSEMCGSMTLLTASMQTKEVEGASPTIKDVLLVIDSLKKQVAADRIVSVKKRMEENRQKLVGFTNHLCKLSMERRTCSITDTDRSLDLLTKRQKDAIDMYNGVHPSNGDRESNGYHEPIILTTTAAKNAVHSIKLPEVKRLPPYTTWIFLDRNQRMTEDQSVVGRRRIYYDQNGGEALICSDSEEEIIEEEEEKREYVESEDYILRMTVREFGLSDTVLESLSQCFSRNTSDIKARYETLSNEDNAGGGSKNGDTEENSQNGNSFLEKDLEAALDSFDNLFCRRCLVFDCRLHGCSQDLVFPAEKQPLWSPPDTENSPCGPNCFRLVLKSERFAKGTSSTQADVEDKCSGGALSRKKSSARRRIKCSQSESASSNAKNISESSDSENGPGRDAVSASHSAPSKTKSVGKSGIGKRNSKRVAERVLVCMQKRQKKTVASDSDSISEALDRSLNDTVTDPHVMSGEDKRKEEFVDENVCKQEITDNKSWKALEKGLLEKGMEIFGRNSCLIARNLLNGLKTCWDVFQYINCEDGKISGPAGDAANSLVDGYSKGNNEVRRRSRFLRRRGRVRRLKYTWKSAAYHSIRKRITERKDQPCRQYNPCGCQSACGKQCPCLQNGTCCEKYCGCPKSCKNRFRGCHCAKSQCRSRQCPCFAADRECDPDVCRNCWVSCGDGTLGIPNQRGDNYECRNMKLLLKQQQRVLLGRSDVSGWGAFLKNSVGKHEYLGEYTGELISHREADKRGKIYDRENSSFLFNLNDQFVLDAYRKGDKLKFANHSPDPNCYAKVIMVAGDHRVGIFAKERICAGEELFYDYRYEPDRAPAWARKPEASGSKKEDGAPSSGRAKKLA 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi733g00005 930 Gene3D SET domain 681 898 IPR046341 -
Sebi733g00005 930 ProSiteProfiles CXC domain profile. 667 766 IPR026489 -
Sebi733g00005 930 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 4 930 IPR025778 GO:0031519
Sebi733g00005 930 MobiDBLite consensus disorder prediction 447 493 - -
Sebi733g00005 930 ProSiteProfiles SET domain profile. 781 896 IPR001214 GO:0005515
Sebi733g00005 930 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 105 928 IPR045318 GO:0006338|GO:0042054
Sebi733g00005 930 SMART CXC_2 715 752 IPR033467 -
Sebi733g00005 930 MobiDBLite consensus disorder prediction 417 498 - -
Sebi733g00005 930 MobiDBLite consensus disorder prediction 325 344 - -
Sebi733g00005 930 MobiDBLite consensus disorder prediction 904 923 - -
Sebi733g00005 930 MobiDBLite consensus disorder prediction 319 344 - -
Sebi733g00005 930 Coils Coil 262 283 - -
Sebi733g00005 930 MobiDBLite consensus disorder prediction 904 930 - -
Sebi733g00005 930 Pfam CXC domain 719 750 IPR041355 -
Sebi733g00005 930 CDD SET_EZH 781 897 - -
Sebi733g00005 930 SMART set_7 781 902 IPR001214 GO:0005515
Sebi733g00005 930 FunFam Putative histone-lysine N-methyltransferase EZH2 681 898 - -
Sebi733g00005 930 Pfam SET domain 792 895 IPR001214 GO:0005515
Sebi733g00005 930 SUPERFAMILY SET domain 655 901 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi733g00005 Sebi-Chr733 79728 88001 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi733g00005 770 899 C2H2 Transcription Factor Family AT2G23740 27.211 1.00e-09 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Sebi733g00005 SET 9.3e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi733g00005 - K11430 gmx:100799832 1495.33