Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi731g00006 ATGGAGCCCATATTCTTTGTTATAAATTTTAAAGAACCAGTTATCGTCTGGGATGATAAAGGGTTTATTCAAGAAAGTTCCAAACACCGTATTGCCATGGAGAAGTCAGCAAGCCTGAACAGTTCGACTGACGCTTCAACGAGGGATGATGATGATATGATTGGGGTTCCTTTCATAGCATCTTGGCTACCATATCGGTCCTCAATCATAAATGCAAAAAAATTGATTTCAAGTTTTCAAACAGAGTTACCAAAGGAGATGAGGGCTTTTTACCATGTTCATTATCTAGTACACATGTGGTACAGATACGTTGGAAATGCTACATTCAGCTTCGAACTATGGCCTAAAGATGGGGAAGACCAGATTGATTATCCTAATCCACCTATAAAAAAGGAAGATCAGGAACAATGTGTCAACCAACCTGGGACAACATCAAACAGTGATGACGAAGATGTAGGTAGTGAAGCAGATGAAATCATGGGAGTTCGCGGTGAAGACCTATGGACGACTACACTTACTAAAGCACAGGTGGAAGGCAGGCAGGCAGTGGTTATACCGGAGAGGGTTGTGACCTCTTACTTCCACAACAGGCCTAAGAAGTTCAAAGTTAGATTACTAGATGACCATATCAAATCGTGGGAATTGATTTGGAATCGACGAATACCGACGGAGTGCAAAATTGGACATGGTTGGACTGAATTTTGTACGACACATGGGCTGGAAAAAGGAGACCACATCAGGTTTTGGAAGTTGGAAAATGAAGCCTTCATCAGAATCGTTCGGACAAGATCCTCCACTTAG 801 0.4195 MEPIFFVINFKEPVIVWDDKGFIQESSKHRIAMEKSASLNSSTDASTRDDDDMIGVPFIASWLPYRSSIINAKKLISSFQTELPKEMRAFYHVHYLVHMWYRYVGNATFSFELWPKDGEDQIDYPNPPIKKEDQEQCVNQPGTTSNSDDEDVGSEADEIMGVRGEDLWTTTLTKAQVEGRQAVVIPERVVTSYFHNRPKKFKVRLLDDHIKSWELIWNRRIPTECKIGHGWTEFCTTHGLEKGDHIRFWKLENEAFIRIVRTRSST 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi731g00006 266 SMART B3_2 168 263 IPR003340 GO:0003677
Sebi731g00006 266 SUPERFAMILY DNA-binding pseudobarrel domain 168 262 IPR015300 -
Sebi731g00006 266 ProSiteProfiles B3 DNA-binding domain profile. 168 265 IPR003340 GO:0003677
Sebi731g00006 266 CDD B3_DNA 169 254 IPR003340 GO:0003677
Sebi731g00006 266 MobiDBLite consensus disorder prediction 122 154 - -
Sebi731g00006 266 Pfam B3 DNA binding domain 169 259 IPR003340 GO:0003677
Sebi731g00006 266 Gene3D - 149 264 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi731g00006 Sebi-Chr731 102848 104352 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Sebi731g00006 B3 6.2e-12 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi731g00006 - K12063 cave:132171416 45.4394