Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi731g00004 ATGGCAGATGATGGTGACAATGCATTTCATTACGACTCTCGTCAATTTGTAATTGGGGTGGATTCTGAGGCTGATTTTGTTGACCTTAATCCTGACTTGTTATCTGAGGAAAACTTGAAGAATTTCAATTTTCCTAATCTGGATGTTGCTTTTAATTTTTACAATAATTGGTATGGAAAAATGAAGGGTTTTTCAGCACGAAAGGGCAAAGACCGTAAAAATGCAATGGAAGAAATTATTGAGAAGACGTATCTATGCCATAGGGAAGGAAAGAGACCAATTAATACGAATGAAAAGACGGGGAAGAAAAAACGTGAAGCAAAGCCTGAGACTAGGTGTTTATGTCCTGCAAAAATGAAGGTTCGATTAGATGTACATTCTGGCCGTTGGAACGTGATCAAGTTTTGTGATGCCCATAATCTTGAAATGCTAAACCCCAAATACACAGGGATGCTACCGGCTCATAGGAAATTGAGTGAAGCTGATATCTTGGAGATGAATAACATGCGGAATGCAGGTATTACTACACCTCAAATTTATGGGTCATTTGCCAGCCAATCTGGTGGGTACAACAATGTTGATTTTCGGAAAAGAGATCTTTACAATTAG 609 0.3842 MADDGDNAFHYDSRQFVIGVDSEADFVDLNPDLLSEENLKNFNFPNLDVAFNFYNNWYGKMKGFSARKGKDRKNAMEEIIEKTYLCHREGKRPINTNEKTGKKKREAKPETRCLCPAKMKVRLDVHSGRWNVIKFCDAHNLEMLNPKYTGMLPAHRKLSEADILEMNNMRNAGITTPQIYGSFASQSGGYNNVDFRKRDLYN 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi731g00004 202 Pfam FAR1 DNA-binding domain 52 143 IPR004330 -
Sebi731g00004 202 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 37 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi731g00004 Sebi-Chr731 99747 100452 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi731g00004 FAR1 1.3e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi731g00004 - - mtr:112417123 174.481