Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi730g00011 ATGGGTTCTCAGCAGAACGATGGCACAAGCTACCCACCATCGGAGCCCAAGCCCTGCGCCAACAACTGCGGCTTCTTCGGCACCGCCGGGAACCAGAACCTCTGTTCCAAATGCTACAGAGACTTGTCCATTCAAGAAGTGCATGCCGCTACTGCAAAAGCCGCCATGGAGAAATCCCTGCTCCTCCCCGCCGCCGCCATAACCGCCTCTCCGGCCGTTCTTGTAGCGGAGCCTTCATCTTCCGCTGAGCCGTCTGCTGCGCCGGCGAAGGCGGCCAATCGGTGCGGCAGTTGTAACAAGAAAGTGGGGTTGACAGGGTTCGTGTGCAAGTGTGGGACCACCTTCTGTGGGACCCATCGTTATCCTGAGAAGCATCAGTGCTCGTATGACTTCAAGACTGCCGGGCGTGATGTGATTTCCAAGGCCAATCCCATAATAAAGGCCGACAAAATTCAAAGGTTCTAG 465 0.5656 MGSQQNDGTSYPPSEPKPCANNCGFFGTAGNQNLCSKCYRDLSIQEVHAATAKAAMEKSLLLPAAAITASPAVLVAEPSSSAEPSAAPAKAANRCGSCNKKVGLTGFVCKCGTTFCGTHRYPEKHQCSYDFKTAGRDVISKANPIIKADKIQRF 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi730g00011 154 ProSiteProfiles Zinc finger A20-type profile. 13 47 IPR002653 GO:0003677|GO:0008270
Sebi730g00011 154 FunFam Zinc finger AN1-type containing 6 70 150 - -
Sebi730g00011 154 ProSiteProfiles Zinc finger AN1-type profile. 89 135 IPR000058 GO:0008270
Sebi730g00011 154 SMART A20_3 16 40 IPR002653 GO:0003677|GO:0008270
Sebi730g00011 154 Gene3D - 69 150 IPR035896 -
Sebi730g00011 154 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 19 61 - -
Sebi730g00011 154 Pfam AN1-like Zinc finger 95 131 IPR000058 GO:0008270
Sebi730g00011 154 Pfam A20-like zinc finger 18 40 IPR002653 GO:0003677|GO:0008270
Sebi730g00011 154 SUPERFAMILY AN1-like Zinc finger 80 149 IPR035896 -
Sebi730g00011 154 Gene3D - 2 60 - -
Sebi730g00011 154 PANTHER AN1-TYPE ZINC FINGER PROTEIN 16 153 - -
Sebi730g00011 154 SMART AN1_Zf_4 95 132 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi730g00011 Sebi-Chr730 119269 119733 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi730g00011 13 154 C2H2 Transcription Factor Family AT3G52800 40.373 1.27e-36 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi730g00011 - - qsa:O6P43_024274 207.994